Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca03g02132 ATGCCAAACACGCCGCGAACCAGAAAAAGAAACAACCTCAGCCGCCTCAACCTAAACCTATGTTTCTCAAATCCAATGCAACCCTTCACACCCGAGTCTCCTACATCCGTTGATCACAATCACAACCCTGCATCCTCACCCGCCACGTCATCAACGAACCTCGAATCCAAATCCGAACCCGAACCTGCCGACTTCGCCACCGCCTGCGCCTCCCAGCGCTTCTTCTTCTCCTCCCCCGGCCGCTCCAACTCCATCGTCGAATCCACCGGCGCCGCCGTGGAGGAGAGGGCGAGGGCGGCGTTCTCCGGGAGCGTGGCGGTGGCGACGTACTCGCCGGACCCTTACGCGGACTTCCGGCGGTCGATGGAGGAGATGGTGGAGGCGCGTCCGGAGTTGATGGACGTGAAGTCCAATTGGGACGTGCTGCAGGAGCTTCTTCTCTGCTATCTGGCGCTCAACCCCAAAACCACGCACAAGTTCATTCTCACTGCCTTCTCTGACCTTCTCGTTAGCCTCGTCGGCTTCTCCTCCTCCGCCTCTTCGCCGCCGCCGAATCCCGCTCCCGACGACGTCGCCTCCGGTGGCTGTTCCAATTAG 597 0.6047 MPNTPRTRKRNNLSRLNLNLCFSNPMQPFTPESPTSVDHNHNPASSPATSSTNLESKSEPEPADFATACASQRFFFSSPGRSNSIVESTGAAVEERARAAFSGSVAVATYSPDPYADFRRSMEEMVEARPELMDVKSNWDVLQELLLCYLALNPKTTHKFILTAFSDLLVSLVGFSSSASSPPPNPAPDDVASGGCSN 198
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca03g02132 198 ProSiteProfiles OVATE domain profile. 107 171 IPR006458 -
Cca03g02132 198 TIGRFAM A_thal_3678: uncharacterized plant-specific domain TIGR01568 105 172 IPR006458 -
Cca03g02132 198 MobiDBLite consensus disorder prediction 24 62 - -
Cca03g02132 198 PANTHER TRANSCRIPTION REPRESSOR OFP12 33 177 - -
Cca03g02132 198 MobiDBLite consensus disorder prediction 24 58 - -
Cca03g02132 198 MobiDBLite consensus disorder prediction 178 198 - -
Cca03g02132 198 PANTHER TRANSCRIPTION REPRESSOR OFP7-RELATED 33 177 IPR038933 GO:0045892
Cca03g02132 198 Pfam Transcriptional repressor, ovate 111 172 IPR006458 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca03g02132 Cca-Chr3 41861285 41861981 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF OFP Cca03g02132 Ovate 2.1e-24 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca03g02132 - - gmx:102659610 198.749
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca03g02132 03 41861285 41861981 Cca02g01127 02 28573535 28574399 PCT