Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca03g02130 ATGGAGGTTTTGCGGTCTCAGAGAAGGCCCAAGGAATCCGGGAGTGGTGAGGATCAAAGACAGGCCTTGTACTTAAACCTTCCAAACAATGGACAAAAAGATAAAATTCTTGTCAGAGAGACTAAATCTGAGAAGGTTTGCTCGAGAAATAATGAGACCAAGAAGCAGCTATATGTCCCAGGCACAGGACAACAAACTGTGCTTTCGTGGTTGGTTGATATGGGAACACTCCAGCCACATCACCAGTCCTGTCTCAAGTCCATTGGAGCCAATACTGCTCATTCTAAACAGGAATTCTTATGTGGAAACAGTTGTAAAGAGTTATATGAGAGACTTGAAAAACTTCTTGGTGTTAAATATCAAACAGAAGATGGGTTTTCTTGGTCTTTTATTTGTCGGACAGATTTTGATTCTAATGCCTCCCAGCTAGAACCCCGGATGGTTGAATGTAATTCCAAATTGGGTGTTGCATTGTCAATAATGAATGAGTGCTTCCTCCCATGCATAGTTAACAAAAGCAGGATTAATCTGATGCGCAGTGTTATATATAATTGTGGGTCAAACATCAGTCGCCTGGATTTCAAGAGATTTGTTACTGCAATTTTACAGAGATATGATGAGATTATCAGTGTTGCATCTATCAGGATCCATGGGAACCAACTAGCTGAGATGCCATATATTGGGACCCGCTCGATTTACAGGCGACAAGGAATGTGCAGCAAACTTTTAAGCTCCATTGAATTGGCACTCAGCTTTCTAGAAGTCGAGTTATTGGTCATACCTGTTGTCTCAACAGTAAAAAATACGTGGATTGATGCTTTTGGGTTTGAGCCACTTGATTTGAGAAGCAAGACAATAATAAAGGGCATGAATTTGTTGGTATTCCCTAACACAGAAATATTGCAGAAAAAGATACCAAAGCGTTATTTTTCCATTAATTTTACTCCTACACAAGAGAGAAGAGTAGCAAAAGCTTCTCTTTTGAATGTGGATTGTTTGGTAGGGATTGGTGGGGAAGAAGGAAAGAGATGGGGGGGAGGAATTGAGGAGGAAGGAAAATATGAAGCTTGTGATGGGAATATTGTGACTATAGAGATTCCAcactag 1107 0.402 MEVLRSQRRPKESGSGEDQRQALYLNLPNNGQKDKILVRETKSEKVCSRNNETKKQLYVPGTGQQTVLSWLVDMGTLQPHHQSCLKSIGANTAHSKQEFLCGNSCKELYERLEKLLGVKYQTEDGFSWSFICRTDFDSNASQLEPRMVECNSKLGVALSIMNECFLPCIVNKSRINLMRSVIYNCGSNISRLDFKRFVTAILQRYDEIISVASIRIHGNQLAEMPYIGTRSIYRRQGMCSKLLSSIELALSFLEVELLVIPVVSTVKNTWIDAFGFEPLDLRSKTIIKGMNLLVFPNTEILQKKIPKRYFSINFTPTQERRVAKASLLNVDCLVGIGGEEGKRWGGGIEEEGKYEACDGNIVTIEIPH 368
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca03g02130 368 MobiDBLite consensus disorder prediction 1 16 - -
Cca03g02130 368 PANTHER FINGER PROTEIN, PUTATIVE-RELATED 80 313 - -
Cca03g02130 368 PANTHER PHD FINGER PROTEIN 12 80 313 IPR042163 GO:0003714|GO:0045892
Cca03g02130 368 MobiDBLite consensus disorder prediction 1 21 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca03g02130 Cca-Chr3 41831240 41839011 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca03g02130 80 305 PHD Transcription Factor Family AT1G05380 50.431 2.32e-71 239
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca03g02130 - - ccaj:109796006 313.923