Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca03g02124 ATGACGACGATACGCAGATTTTGCTGCAACGATCTCCTTCGCTTCACCTCCGTCAATCTCGACCATCTCACCGAAACTTTTAACATGTCCTTCTACATGACCTATCTTGCAAGATGGCCCGATTATTTCCACGTCGCCGAAGGCCCTGGTAACCGAATCATGGGTTACATTATGGGTAAAGTAGAGGGGCAAGGAGAATCTTGGCATGGCCATGTGACTGCAGTGACCGTCGCTCCAGAGTATCGCAGGCAGCAGTTAGCTAAGAAGCTTATGAATCTGTTGGAAGACATCAGTGACAACATTGACAAGGCTTACTTTGTTGATCTCTTTGTGAGGGCATCAAATGCACCAGCCATCAAGATGTATGAAAAGCTTGGTTATGTGATTTATCGACGAGTGCTGCGCTACTATTCTGGGGAAGAAGATGGTTTAGATATGAGGAAGGCATTGTCCCGTGATGTTGAAAAGAAGTCCATCATCCCTCTTAAACGGCCGGTCACTCCTGATGAACTAGAGTGCTGA 522 0.4674 MTTIRRFCCNDLLRFTSVNLDHLTETFNMSFYMTYLARWPDYFHVAEGPGNRIMGYIMGKVEGQGESWHGHVTAVTVAPEYRRQQLAKKLMNLLEDISDNIDKAYFVDLFVRASNAPAIKMYEKLGYVIYRRVLRYYSGEEDGLDMRKALSRDVEKKSIIPLKRPVTPDELEC 173
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca03g02124 173 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 1 150 IPR016181 -
Cca03g02124 173 Gene3D - 2 162 - -
Cca03g02124 173 CDD NAT_SF 45 97 - -
Cca03g02124 173 PANTHER N-ALPHA-ACETYLTRANSFERASE 20 1 172 - -
Cca03g02124 173 PANTHER N-ALPHA-ACETYLTRANSFERASE 20 1 172 - -
Cca03g02124 173 Pfam Acetyltransferase (GNAT) family 39 127 IPR000182 GO:0016407
Cca03g02124 173 ProSiteProfiles Gcn5-related N-acetyltransferase (GNAT) domain profile. 2 151 IPR000182 GO:0016407
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca03g02124 Cca-Chr3 41700598 41711776 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR GNAT Cca03g02124 Acetyltransf_1 7.6e-15 CL0257
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca03g02124 K17972 - gmx:100306394 349.747
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca03g02124 03 41700598 41711776 Cca03g02124 03 41700598 41711776 ECH