Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca03g02069 ATGTCACTCTGTCTGTTCCTTATCACCATCTTCCTCACTTACCCTTTTCTTTCCCTCTCTGTTTCATGTCCCCTCAACATCAACCTCCTCCACCGTTACACACCCTCTTCAAACTCTGTCACACGCTGCCACGACATCCTCCAATCCCTTCGAATCCTTCGATCCGAATACCTCCAACGAACTCGTTTcttctcccctcctcctaactcctccttctcctgctGGAACAATATCCAACATTTCATCCACCAATACGACATTCGCTCCTCCTGCAACATCACTTCCTGTTCCACTTTCAACTCATGCACCACCTTCACAACACGATCGCAATTCGAGGGATATATTCCTGTTTCCGTGCTTCGACCCGTGTGGAAGACTTGTAACCAATCTCTTAGCGCTCCAGTACCTTGTACTCTCTGCACCAACGCTTTCTCCGACTTGAATTCCTACCTTACTAGGAGAACCGCTGATTGCAACGCTATTGCTTTTATTTATGCTGCTTCCTTCTCCGATTTGCAAGACCCCGGAACCGCTAAATGTTTGTTCAGCTTTGGTTTTTCCTCTTCTGCTAAAAGTGGTAAGCGTCGAACCATTCTTATTGTGCTTTTTTCTATCTTAGCCGTCTTCTTGCTGGTCTTGGGTGCCCTCTGGGCTTACTTTAGATTAAGGAACAACAAAAAGGGTGTTGCTTTGGATTCTGGGTTGGATTCCATGAACCAAAGTACCACTTTGGTTAGGTTCACTTTTGATGACATTAAAATGGCTACTAGGAACTTTGCCGCTGACAACGTAATTGGGAAGGGGGGTTATGGAAATGTTTATAAAGGAACCCTCTTGGATGGTAGTCAAGTTGCGTTTAAACGTTTCAAGAATTGTTCTGTTGCCGGGGATGCTAGCTTCACTCATGAAGTTGAGGTTATTGCTAGTGTTAGGCATGTGAACCTTGTTACCTTACGAGGCTATTGTACTGCTACCACTGATTTAGAGGGTCACCAAAGGATTATTGTCACTGATTTGATGGAAAATGGAAGTCTTTTTGATCATTTAGTTGGTTCGGCCAAGAAGAATCTGAGTTGGCCGATTCGTCAGAAGATTGCTCTAGGCACTGCTAGGGGGTTAGCTTATTTGCATTACGGGGCACAACCTTCGATTATCCATAGGGATATTAAGGCAAGTAACATTCTTCTGGATCACAAGTTTGAGGCGAAGGTGGCGGATTTTGGGTTGGCCAAGTTCAAGCCAGAGGGAATGACGCATATTAGTACCAAAGTGGCTGGGACTATGGGCTATGTTGCTCCTGAGTATGCCTTGTATGGACAGTTGACTGAGAGAAGTGATGTGTTCAGTTTTGGTGTTGTGCTTCTTGAACTTTTGAGTGGGAAGAAGGCTCTTCAAACGGATCATGATGGTCAACCCTATGCACTCACTGATTTTGCTTGGTCATCAGTTAGGAACGGTAATGCTTTGGATGTTGTTGAAGATGGCATGCCAGAACCTGGTCCACCACGAGTTCTTGAGAAGTATGTGTTGGTTGCTGTTCTGTGTTGTCATCCACAGTTATATGCAAGGCCAACAATGGATCAAGTGGTTAAAATGCTGGAGACAGATGAATTGGAACAGCAAATGTCTTGTGTTGCTGGGAGTATCTACAGTGAGTAG 1659 0.4376 MSLCLFLITIFLTYPFLSLSVSCPLNINLLHRYTPSSNSVTRCHDILQSLRILRSEYLQRTRFFSPPPNSSFSCWNNIQHFIHQYDIRSSCNITSCSTFNSCTTFTTRSQFEGYIPVSVLRPVWKTCNQSLSAPVPCTLCTNAFSDLNSYLTRRTADCNAIAFIYAASFSDLQDPGTAKCLFSFGFSSSAKSGKRRTILIVLFSILAVFLLVLGALWAYFRLRNNKKGVALDSGLDSMNQSTTLVRFTFDDIKMATRNFAADNVIGKGGYGNVYKGTLLDGSQVAFKRFKNCSVAGDASFTHEVEVIASVRHVNLVTLRGYCTATTDLEGHQRIIVTDLMENGSLFDHLVGSAKKNLSWPIRQKIALGTARGLAYLHYGAQPSIIHRDIKASNILLDHKFEAKVADFGLAKFKPEGMTHISTKVAGTMGYVAPEYALYGQLTERSDVFSFGVVLLELLSGKKALQTDHDGQPYALTDFAWSSVRNGNALDVVEDGMPEPGPPRVLEKYVLVAVLCCHPQLYARPTMDQVVKMLETDELEQQMSCVAGSIYSE 552
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca03g02069 552 Pfam SPARK 20 155 IPR043891 -
Cca03g02069 552 CDD STKc_IRAK 265 534 - -
Cca03g02069 552 SMART serkin_6 259 533 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cca03g02069 552 SUPERFAMILY Protein kinase-like (PK-like) 237 534 IPR011009 -
Cca03g02069 552 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE RKF3-RELATED 20 540 - -
Cca03g02069 552 ProSiteProfiles Protein kinase domain profile. 259 520 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cca03g02069 552 Gene3D Transferase(Phosphotransferase) domain 1 340 548 - -
Cca03g02069 552 ProSitePatterns Protein kinases ATP-binding region signature. 265 287 IPR017441 GO:0005524
Cca03g02069 552 ProSitePatterns Serine/Threonine protein kinases active-site signature. 384 396 IPR008271 GO:0004672|GO:0006468
Cca03g02069 552 Pfam Protein kinase domain 262 531 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cca03g02069 552 PANTHER OS01G0750732 PROTEIN 20 540 - -
Cca03g02069 552 Gene3D Phosphorylase Kinase; domain 1 225 338 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca03g02069 Cca-Chr3 40944890 40946673 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca03g02069 22 538 Receptor kinase-like Gene Family AT2G48010 58.998 0.0 634
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RKF3 Cca03g02069 Pkinase 1.7e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca03g02069 - - gmx:100819980 784.637