Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca03g02019 ATGTATCAGTATAGTTCCCAGATGTACGGAACTGAATGGGAATCCTACATGGGAATTACCAACCTAGCCAAGGTTGTTTCATCAGAACAGCTATGTGTTGATCCAACAAAATCACCCTTCAACATTGTGACCACTCCTCTTCAAACTCCACCAGGTTTTTGTGCAACCAGAAGCCTTGTGAGTTTTCAAGCTCAACAACATGATCAGATTGAAGTTCCTGCTTGGTGCTTTGAGTTTCCAAAGACCACGACGACAACAACAACAATAGACTCTGGAGATAACTTCACCAGTACCAAGCAAGATCTACCATCCTCACAATTCACAAGCTCCTTATTGTGCCCGGTTGCTGAATCTTTCTTGTCTAGTAATAGTTCAGATTGTCCTTCTTCTTCTGAAAAGTATTGTAAATTTGCTTGCTCTGAAAAGTATAGCGATATTCAGCCTGACAGTGTGCCATATTATGATCAATTTTCACAAGATGATAAGTTACTGAGGGATGATGCTGCCACAGATGAAAGGCCCCTTGAGATTTCCTTTCAGAGAAACCAGTTGGTCTCGTGTAGAAAGCGAGAAAAGCAGGGTCCTCGTCAACATTGTGGGGGTGCCTGTTTAACTTCAAGTAACTCTGCTTTTAGGAGAGGCAAAAGAAGAATAAAATGGACCAAAGATCTGCATGAACCATTTATGATGATTGTTAAAAGCCTTGGTGGCCCCGAAAAGGCAAAGCCAAAGGCTATACTAGAGATGATGAAATCAGATTTGCTGTCCATTTCTCACGTTAAAAGTCATTTGCAGAAATGTCGGTCCACAATACACATGCACAAAGATTTACAGGGTAAACTACTTCTGTCATTGTCCATGTGTTGTATATTACTGCCATGCATACCTCGTGAAATTCTTTAA 903 0.4097 MYQYSSQMYGTEWESYMGITNLAKVVSSEQLCVDPTKSPFNIVTTPLQTPPGFCATRSLVSFQAQQHDQIEVPAWCFEFPKTTTTTTTIDSGDNFTSTKQDLPSSQFTSSLLCPVAESFLSSNSSDCPSSSEKYCKFACSEKYSDIQPDSVPYYDQFSQDDKLLRDDAATDERPLEISFQRNQLVSCRKREKQGPRQHCGGACLTSSNSAFRRGKRRIKWTKDLHEPFMMIVKSLGGPEKAKPKAILEMMKSDLLSISHVKSHLQKCRSTIHMHKDLQGKLLLSLSMCCILLPCIPREIL 300
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca03g02019 300 SUPERFAMILY Homeodomain-like 214 270 IPR009057 -
Cca03g02019 300 Gene3D - 214 271 - -
Cca03g02019 300 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL7-LIKE 17 280 IPR044848 GO:0003700
Cca03g02019 300 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 215 269 IPR006447 GO:0003677
Cca03g02019 300 PANTHER MYB-LIKE DNA-BINDING DOMAIN, SHAQKYF CLASS PROTEIN 17 280 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca03g02019 214 282 G2-like Transcription Factor Family AT5G06800 55.072 1.53e-17 79.3
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Cca03g02019 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca03g02019 - - gmx:102662952 408.683