Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca03g02004 ATGGCTGATTACCAAGGCTACATCATACTTTTCATCACATGGCTAGTCTCCACAATTGTAGTTAGATTCATACTCAACAGAAAACAGAACAAGACTAATAGACCACCAAGTCCATTAGCCTTACCCATCATTGGACATCTCCACCTTCTTGCTCCAATACCTCACCAAGCACTTCACAAGCTCTCTACCCGCTATGGACCCATAATGCAACTTTTCCTTGGTTCCGTGCCCTGTGTCGTAGCTTCCACGCCAGAAGCAGCCCGAGAATTCCTCAAAACTCACGAAACACATTTCTCCAACCGCCCTCAAAGTTCTGCAGTTGATTATCTAACCTATGGCTCTCAGGACTTCTCCTTTGCCCCATATGGACCATATTGGAAGTTCATGAAGAAAATATGCATGTCTGAACTTCTGGGGGGTCACACACTGAGTCAGCTTCTTCCTGTGAGGAGACAGGAGACATTGAGGTTTCTGAGACTTATGCTGGGGAAAGGGAAGGAAGTTGAGGCTGTTGATGTTGGAGGAGAACTATTGAGACTCTCAAATAACGTCGTGTCAAGGATGCTTATGAGCCAAACATGTACTGAAAATGAGAGTGAAGCAGAAGAGGTGAGGAAGTTGGTGCATGACACTGTACAACTGACGGGGAAGTTTAATGTGTCGGACTTCATTTGGTTTTTTAGGAACTGGGATGTGCAGGGGTTCGGGAAAAGACTCAAGGAAATTCGGGACAGCTTTGATACCATGATGGATAAGGTGATCAAGGAACATGAAGAAGAGAGGAGGAAAAGAAATGAAATGGGAAGTGGAGGAGAGGGTCAAATCAAGGATCTACTTGATATATTGTTGGACATACATTATGATGAGAATTCTGACATAAAATTGTCAATAGAGAACATAAAGGCCTTCATCTTGGATGTATTTATGGCAGGAACAGACACTGCAGCCTTAACAACTGTGTGGGCTCTAGCCGAGTTGATTAATCACCCACATATGATGGAGAGAGCAAGAAAAGAGATTGATGCTGTGATCGGAAATAGTAGAATAGTAGAAGAATCAGACATTGTCAACCTTCCTTACCTGCAAGCTGTAGTCAAGGAAACGCTGAGGATTCACCCCACGGGTCCATTAATTGTTAGAGAATCATCTGAAAGCTGCACTATCTGGGGCTATGAGATTCCAGCAAAGACTCAGTTGTTTGTTAATATTTGGGCTATTGGAAGGGACCCAAATCACTGGGAGAACCCACTCGAGTTCAGGCCAGAGAGGTTTATCAGTGAAGAGGGAAGTGGGAAGAGCCTTTTAGATGTGAGGGGGCAGCATTTTCACCTGATTCCATTTGGGAGTGGAAGAAGAGGGTGCCCTGGAACCTCACTGGCTTTGCAGTTTGTGCAGACCAACCTTGCTGCTATGCTTCAGTGCTTTGAATGGAAGGTTAAAGGAGGCAAACAGACTGTTGACATGGAAGAGAAACCCGGGATAACTCTTCTAAAGGCTCATCCGTTGATTTGTGTCCCATTGCCTAGGCTTGATCCATTCCCTCCCCAGTGA 1551 0.4494 MADYQGYIILFITWLVSTIVVRFILNRKQNKTNRPPSPLALPIIGHLHLLAPIPHQALHKLSTRYGPIMQLFLGSVPCVVASTPEAAREFLKTHETHFSNRPQSSAVDYLTYGSQDFSFAPYGPYWKFMKKICMSELLGGHTLSQLLPVRRQETLRFLRLMLGKGKEVEAVDVGGELLRLSNNVVSRMLMSQTCTENESEAEEVRKLVHDTVQLTGKFNVSDFIWFFRNWDVQGFGKRLKEIRDSFDTMMDKVIKEHEEERRKRNEMGSGGEGQIKDLLDILLDIHYDENSDIKLSIENIKAFILDVFMAGTDTAALTTVWALAELINHPHMMERARKEIDAVIGNSRIVEESDIVNLPYLQAVVKETLRIHPTGPLIVRESSESCTIWGYEIPAKTQLFVNIWAIGRDPNHWENPLEFRPERFISEEGSGKSLLDVRGQHFHLIPFGSGRRGCPGTSLALQFVQTNLAAMLQCFEWKVKGGKQTVDMEEKPGITLLKAHPLICVPLPRLDPFPPQ 516
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca03g02004 516 PRINTS P450 superfamily signature 310 327 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca03g02004 516 PRINTS P450 superfamily signature 363 374 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca03g02004 516 PRINTS P450 superfamily signature 445 454 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca03g02004 516 PRINTS P450 superfamily signature 454 465 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca03g02004 516 PANTHER CYTOCHROME P450 FAMILY PROTEIN 4 513 - -
Cca03g02004 516 PANTHER FLAVONOID 3'-MONOOXYGENASE-RELATED 4 513 - -
Cca03g02004 516 PRINTS E-class P450 group I signature 62 81 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca03g02004 516 PRINTS E-class P450 group I signature 86 107 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca03g02004 516 PRINTS E-class P450 group I signature 299 316 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca03g02004 516 PRINTS E-class P450 group I signature 319 345 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca03g02004 516 PRINTS E-class P450 group I signature 362 380 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca03g02004 516 PRINTS E-class P450 group I signature 402 426 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca03g02004 516 PRINTS E-class P450 group I signature 444 454 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca03g02004 516 PRINTS E-class P450 group I signature 454 477 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca03g02004 516 SUPERFAMILY Cytochrome P450 35 509 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca03g02004 516 Pfam Cytochrome P450 35 503 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca03g02004 516 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 447 456 IPR017972 GO:0005506|GO:0016705
Cca03g02004 516 Gene3D Cytochrome P450 19 503 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca03g02004 Cca-Chr3 40148679 40150961 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca03g02004 1 509 Cytochrome P450 AT5G06900 49.119 0.0 525
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca03g02004 K24188 - gmx:100779342 897.501
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca03g02004 03 40148679 40150961 Cca03g02004 03 40148679 40150961 ECH