Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca03g02003 ATGAATCCATGCATGGATGCTTCTGGTGCTACTGTTTTGTGTTTCATCTTCTTTTCCACCATAGCTTTTCTTATCTTCAAGTCCCTTATCACACGAAGCAAAAATAGTAGAACCCCACCAAGTCCACCAAGACTTCCCATCATTGGCCACCTTCACCTTCTAGGCTCAGTCATACCAAAATCATTCCAAGCTCTCGCTCTTCGCCATGGCCCTCTCATTCAGCTTCGCTTAGGTGCCTCAACATGCGTGGTTGTCTCCAACGCGCAAGTTGCCAAAGAAGTGATGAAAACTCACGAACTCAATTTCTGTAACCGACCCCAGTTTGGATCCTCCGAGTACTTCTTATACAAAGGTTCTGGTTTCGTCACTGCCCCTTATGGCCCTTATTGGCGCTTCATTAAAAAACTTTGCGTCACTCAACTGCTCTCAAGCTCACAGCTTGCACGCTTCGTGCACATACGAGAGCATGAGATAGAGAAGCTATTGAAATCTCTTATGGTGTGTTCCACCGAAGGAAGGGCATCGGATTTGAGCTTTGACCTCACTGCTTTGACCAACAGTATCCTGTGTCGGATGGCTATGAGCACCACTTGCTTCGACCAAGTTAATGATGCTGAGGAGATTCTTGGCTTGGTTCGAGAGTTTTTGCATGTGGGTGCTATGTTGAGCATGGGTGAGGTGTTGGGACCTTTGGGAAAGTTTGACTTGTTTGGCTTTGGGAAGAAGCTTGTGAAAATAGTTGACAAATTCGACCGGGTTTTGGAGCGTGTCTTGGAGGAACATGAAGACAAAAACTCAGAAGCACATGGAGGACATACATGTGACATGATGGATATTCTATTGCAGGTTTGTAAAGATCCAAATACTGAAGTCAGGTTAACCAGGAATGATATCAAGGCCTTCTTCCTAGATATTTTCCTTGCAGGAACTGACACGTCTTCAGCGGCGTTACAATGGACCATGGCGGAGATCTTGAACAATCCAGGAGTGTTAAAGAAAGTGAGGGCGGAGATTGATGCAGTGGTGGGGACTAGCAGGTTGGTGAATGAATCAGACGTTCCAAATCTGCGTTACCTCCAGTCTGTTGTGAAGGAAGCGCTGAGACTCCATCCAACGGCACCGTTTGTTCTTAGACAATCATCAGAGGACTGCAGCATCAACGGCTATGATGTAAAGGGCCAGACACGGACACTGATCAATGTCTACGCCATCATGCGGGATCCTCAAGTGTGGGTCAACGCAGAGGAGTTTAAACCAGAGAGGTTCTTGGAAGAAACTGATGGGAGTGGAGGTCAACGTGTGATTGCAATGGACGGTGGTGATTTCAGGTATCTTCCGTTTGGGTTTGGAAGAAGAGGGTGTCCTGGTTCTTCACTTGCCTTAACAGTCATACATGTGACAGTTGCATCGCTCATCCAATGTTTTCAGTGGAAAATCAAAGATGGGGTAAGTATGGAAGAAGGGTCTTCGTTTTCTGCAGGATTGGCAAAGCCTCTTGTTTGTTACCCTGTTACTTGTTTTAATCCTTTTTAG 1533 0.4612 MNPCMDASGATVLCFIFFSTIAFLIFKSLITRSKNSRTPPSPPRLPIIGHLHLLGSVIPKSFQALALRHGPLIQLRLGASTCVVVSNAQVAKEVMKTHELNFCNRPQFGSSEYFLYKGSGFVTAPYGPYWRFIKKLCVTQLLSSSQLARFVHIREHEIEKLLKSLMVCSTEGRASDLSFDLTALTNSILCRMAMSTTCFDQVNDAEEILGLVREFLHVGAMLSMGEVLGPLGKFDLFGFGKKLVKIVDKFDRVLERVLEEHEDKNSEAHGGHTCDMMDILLQVCKDPNTEVRLTRNDIKAFFLDIFLAGTDTSSAALQWTMAEILNNPGVLKKVRAEIDAVVGTSRLVNESDVPNLRYLQSVVKEALRLHPTAPFVLRQSSEDCSINGYDVKGQTRTLINVYAIMRDPQVWVNAEEFKPERFLEETDGSGGQRVIAMDGGDFRYLPFGFGRRGCPGSSLALTVIHVTVASLIQCFQWKIKDGVSMEEGSSFSAGLAKPLVCYPVTCFNPF 510
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca03g02003 510 PANTHER CYTOCHROME P450, FAMILY 712, SUBFAMILY A, POLYPEPTIDE 1 12 510 - -
Cca03g02003 510 SUPERFAMILY Cytochrome P450 33 501 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca03g02003 510 Gene3D Cytochrome P450 31 501 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca03g02003 510 PRINTS P450 superfamily signature 308 325 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca03g02003 510 PRINTS P450 superfamily signature 361 372 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca03g02003 510 PRINTS P450 superfamily signature 445 454 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca03g02003 510 PRINTS P450 superfamily signature 454 465 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca03g02003 510 PRINTS E-class P450 group I signature 66 85 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca03g02003 510 PRINTS E-class P450 group I signature 90 111 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca03g02003 510 PRINTS E-class P450 group I signature 297 314 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca03g02003 510 PRINTS E-class P450 group I signature 317 343 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca03g02003 510 PRINTS E-class P450 group I signature 360 378 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca03g02003 510 PRINTS E-class P450 group I signature 400 424 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca03g02003 510 PRINTS E-class P450 group I signature 444 454 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca03g02003 510 PRINTS E-class P450 group I signature 454 477 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca03g02003 510 Pfam Cytochrome P450 39 487 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca03g02003 510 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 447 456 IPR017972 GO:0005506|GO:0016705
Cca03g02003 510 PANTHER FLAVONOID 3'-MONOOXYGENASE-RELATED 12 510 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca03g02003 Cca-Chr3 40145763 40147832 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca03g02003 11 510 Cytochrome P450 AT2G42250 52.191 0.0 532
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca03g02003 - - gmx:106794180 772.311
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca03g02003 03 40145763 40147832 Cca03g02003 03 40145763 40147832 ECH