Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cca03g01974 | ATGCTTGAACAAGACTGTGTTTCTAGATCACCCTTTTTGCTATGTATTTTTGTTGGCTTCTTGCTGCATCCTGTTGTGTCAACCGTGATACCATTGGGTTCCAAGCTTTCTGTGGTTGACAATAACTTTTGGGTTTCCTCCAATGGTGATTTTGCATTTGGGTTCTTTAACATTTTAGACGAACCTAACCAGTTTAGTGCTGGCATTCGATTCAATTCGAAGTCTATACCATATGACCAACAAACAGTGGTCTGGGTTGTTGGAGCTCATGACAAAGTGAGTAACATGTCCTATTTCCAACTCACTCCTGAAGGGGAACTGATCCTGTTTGATTCCTTACAAGGAGTCACTGTATGGAGGAGTAGAACTGGGAACAGAGCTGTTGTTTCAGCTACTCTTCATGATAATGGCAATCTTGTTCTGATAGACACAGAGCAAAACATCATTTGGCAAAGCTTTGATACTCCATCTGATACACTGCTTCCAGGACAGAGTTTATCTGTTTATAAGACCCTTCGTGCGACAACCAAGAATCCCATGACCAGTTACTACACACTTTACATGAATGCTTCAGGTCAATTGCAGCTCTGCTGGGAGAGAAATATTATATATTGGACAAGTGGAAGCCCTTCTTCTGCTTCAAATCTGACTGCATTTCTTACAACTGGTGGAGCTTTGCAACTTCGAGACCAAAGTTTGAAGGCTGTTTGGAGTGTTTTTGGAGCAGACCATAATGATTCTGTGAATTATCGATTTCTTAGGCTCGAAGTGGATGGAAATCTCCGCCTGTATTCATGGATTGAAGCTTCACAGTCATGGAGATCAGTCTGGCAAGCAGTTGAGAATCAGTGCAAAGTCTTTGCAACATGTGGTCAACTTGGTGTCTGTGTCTTCACTGCTTCCGGTTCTACTGATTGCAGGTGCCCCTTTGAGCTAACTGAGTCTAACCAATGTTTGGTTCCATATGAACAGGAGTGTGAATCTGGATCCAATATGCAACCATATAAGAACACTTATCTGTATGGAATTTATCCTCCTGATGATTCAGTTGTCACAAGTAGTTTGCAGCAATGTGAGCAGTTATGCCTGAATGACACGCAGTGTACGGTTGCAACCTTTTCCAACAATGGTAGACCACGATGCTCCATAAAGAAAACCAAGTATGTTACTGGCTATGCAGATCCATCTCTAAGCTCAATATCTTTTGTTAAAAGTTGTTCAGGTCCATTTGCTGTAAATCCTGCTCTCACCAAGCCACCTCTGCCGAAACTGCCTCGTATGTTCTGTGTTCCTTGTCTAATGGGAGCAGCCTCAGGAACATTTTTCATCTTTGCTATCCTCCAGCTGGGAGTTGTTTTCATCATCTTAAGAAGAAAAAACTCCACCATGCAAAATGTCACGGCAGCTTTCACAAGCCAAAATCCAAAGGGCTTAGTTGTGTTCTCCTTCTCAGAAATTAAGAGCCTCACTGGGGACCTCAAAGATCAAATTGGGCCAAATATGTTCAAGGGTGTGCTACCGAACAATTGCCTGATTGCGGTCAAAGACCTGAATGCATCCATAGATGAAAGGAAGTTTCGAAGTGCTGTTCTAAAGTTGAGCAACATCCACCACAAGAACCTTGTGAAGCTGGAAGGTTATTGTTGCGAGTTTAACCATAGATTTTTGGTGTATGAACATGCCAAAAACGTTTCACTGGATAAATACATTGACGATTGCACTCTTCGCAAGAGGCTAAGTTGGAGAAAGAGAGTTGAAATATGCTCAAGTGTGGCCAAGGCCATTTGTTATTTGCACACCGGGTGTAGGGAGTTTGTGAGCCATGGGAATTTGAAGTGTGAGAATGTCATGTTGGATGAAAATTCAGTGGCTAAGGTGTGTGAATATGGGTTTGCAATAGCAGATGGTGAGGCCACATATTGTGGCTTTTCAGCTGAAAAGGATGTAGGGGATTTTGGGAAGTTGGTATTAACCTTGTTAACAGGGTGCCAAGATCATGAACAACTTTGTGAGTGGACTTACAAGGAATGGATGGAAGGGAGGGGAGTTAATGTGGTTGACAAAAGAATTGAAGGTATTGTCAATTCAGAGGAACTAGAACGTGCATTGAGAATTTCATTCTGGTGCCTTCAAATGGATGAACGTAGAAGACCTTGTATGGAGGAGGTAGTGAGAGTACTAGATGGTACATTGAACGTTGATCCACCACCACCACCATTTGTCTTGCACAGGCCCTCACAGGAAGATGATCCACAAGAAAATGGTTCAGAATAA | 2274 | 0.4248 | MLEQDCVSRSPFLLCIFVGFLLHPVVSTVIPLGSKLSVVDNNFWVSSNGDFAFGFFNILDEPNQFSAGIRFNSKSIPYDQQTVVWVVGAHDKVSNMSYFQLTPEGELILFDSLQGVTVWRSRTGNRAVVSATLHDNGNLVLIDTEQNIIWQSFDTPSDTLLPGQSLSVYKTLRATTKNPMTSYYTLYMNASGQLQLCWERNIIYWTSGSPSSASNLTAFLTTGGALQLRDQSLKAVWSVFGADHNDSVNYRFLRLEVDGNLRLYSWIEASQSWRSVWQAVENQCKVFATCGQLGVCVFTASGSTDCRCPFELTESNQCLVPYEQECESGSNMQPYKNTYLYGIYPPDDSVVTSSLQQCEQLCLNDTQCTVATFSNNGRPRCSIKKTKYVTGYADPSLSSISFVKSCSGPFAVNPALTKPPLPKLPRMFCVPCLMGAASGTFFIFAILQLGVVFIILRRKNSTMQNVTAAFTSQNPKGLVVFSFSEIKSLTGDLKDQIGPNMFKGVLPNNCLIAVKDLNASIDERKFRSAVLKLSNIHHKNLVKLEGYCCEFNHRFLVYEHAKNVSLDKYIDDCTLRKRLSWRKRVEICSSVAKAICYLHTGCREFVSHGNLKCENVMLDENSVAKVCEYGFAIADGEATYCGFSAEKDVGDFGKLVLTLLTGCQDHEQLCEWTYKEWMEGRGVNVVDKRIEGIVNSEELERALRISFWCLQMDERRRPCMEEVVRVLDGTLNVDPPPPPFVLHRPSQEDDPQENGSE | 757 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cca03g01974 | 757 | ProSiteProfiles | PAN/Apple domain profile. | 326 | 406 | IPR003609 | - | |
Cca03g01974 | 757 | SUPERFAMILY | Protein kinase-like (PK-like) | 502 | 727 | IPR011009 | - | |
Cca03g01974 | 757 | Gene3D | Transferase(Phosphotransferase) domain 1 | 562 | 640 | - | - | |
Cca03g01974 | 757 | SUPERFAMILY | alpha-D-mannose-specific plant lectins | 83 | 169 | IPR036426 | - | |
Cca03g01974 | 757 | Pfam | D-mannose binding lectin | 82 | 172 | IPR001480 | - | |
Cca03g01974 | 757 | Pfam | S-locus glycoprotein domain | 245 | 308 | IPR000858 | GO:0048544 | |
Cca03g01974 | 757 | Gene3D | - | 27 | 155 | IPR036426 | - | |
Cca03g01974 | 757 | Pfam | PAN domain | 331 | 406 | IPR003609 | - | |
Cca03g01974 | 757 | MobiDBLite | consensus disorder prediction | 735 | 757 | - | - | |
Cca03g01974 | 757 | CDD | B_lectin | 36 | 156 | IPR001480 | - | |
Cca03g01974 | 757 | ProSiteProfiles | Protein kinase domain profile. | 441 | 757 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Cca03g01974 | 757 | PIRSF | SRK | 637 | 757 | IPR024171 | GO:0004674 | |
Cca03g01974 | 757 | PIRSF | SRK | 5 | 640 | IPR024171 | GO:0004674 | |
Cca03g01974 | 757 | PANTHER | G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD3-1 | 8 | 756 | - | - | |
Cca03g01974 | 757 | Gene3D | Phosphorylase Kinase; domain 1 | 454 | 560 | - | - | |
Cca03g01974 | 757 | ProSiteProfiles | Bulb-type lectin domain profile. | 157 | 276 | IPR001480 | - | |
Cca03g01974 | 757 | SMART | blect_4 | 35 | 156 | IPR001480 | - | |
Cca03g01974 | 757 | Pfam | Protein tyrosine and serine/threonine kinase | 509 | 634 | IPR001245 | GO:0004672|GO:0006468 | |
Cca03g01974 | 757 | SMART | ntp_6 | 327 | 405 | IPR003609 | - | |
Cca03g01974 | 757 | Gene3D | Transferase(Phosphotransferase) domain 1 | 641 | 733 | - | - | |
Cca03g01974 | 757 | ProSiteProfiles | Bulb-type lectin domain profile. | 29 | 154 | IPR001480 | - | |
Cca03g01974 | 757 | SUPERFAMILY | alpha-D-mannose-specific plant lectins | 174 | 275 | IPR036426 | - | |
Cca03g01974 | 757 | Gene3D | - | 156 | 274 | IPR036426 | - | |
Cca03g01974 | 757 | PANTHER | OS07G0415500 PROTEIN | 8 | 756 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Cca03g01974 | Cca-Chr3 | 39702889 | 39706576 | Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Cca03g01974 | 445 | 749 | Receptor kinase-like Gene Family | AT3G45860 | 28.367 | 1.11e-37 | 148 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | RLK-Pelle_L-LEC | Cca03g01974 | PK_Tyr_Ser-Thr | 4.1e-17 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cca03g01974 | - | - | gmx:100809478 | 1362.82 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Cca03g01974 | 03 | 39702889 | 39706576 | Cca03g01974 | 03 | 39702889 | 39706576 | ECH |