Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca03g01933 ATGGAGAGTCGCCTCCTCAAGGATTTCGAGCTCCACCACAAGAATCCCTCCCTCGAAGCTCTCCGCCGATGGCGTTCCGCCGTCGCGCTCGTCAAGAACCGCCGCCGCCGCTTCCGCATGGTCGCCGATCTTGACAAGCGCTCCGAAGCCGAGCAGATTAAGCAGGGAATCAAGCTCTGGAATGGGGGCTGTAGCTCTGAATTTCTGGACTGCCCAAAATGTTCCAAGGATGGAGCTCTGGTTTCATGGCTAAAGCTTCAACTCTCTGGAATACCTCTTTTTGCTTCAGGATTCGTGGCTGCAGCTTTGGCTTTGGGGCTATAG 324 0.5556 MESRLLKDFELHHKNPSLEALRRWRSAVALVKNRRRRFRMVADLDKRSEAEQIKQGIKLWNGGCSSEFLDCPKCSKDGALVSWLKLQLSGIPLFASGFVAAALALGL 107
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca03g01933 107 Gene3D - 16 60 - -
Cca03g01933 107 Pfam Ca2+-ATPase N terminal autoinhibitory domain 6 49 IPR024750 GO:0005516
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca03g01933 Cca-Chr3 39130456 39137666 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca03g01933 1 55 Primary Pumps ATPases AT1G27770 53.571 4.84e-12 58.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca03g01933 K01537 - ccaj:109796343 116.701