Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca03g01903 atGGTTGCATTGTTCTCCCCTCCTGTATTCTCAGCTATGGAGTGGCTCTTAGAGGAGGAGCCATTGAGCTACAACGAGAGGTACTTGTACAAAGATGATGCGTCCTCGGAATTTTGTTCAGCACTTGAGGCACAGGTTGAGATTGGACCATCATCCCCTGACCCTGCCATGGTCAAGAAGCTTAGCCACAATGCTAGTGAACGTGATCGCCGCAAGAAGGTCAATCACTTGGTTTCTTCACTTCGTTCACTTCTTCCACTCGCAGATCAAACGAAAAAAATGAGCATTCCAGCGACAGTTTCACGAGTCTTAAAATACATACCTGAGTTACAACAGCAAGTGCAAGGACTAACAAAGAAAAAAGAAGAGCTTCTGCGCAGAATTTCTCGGCAATTGCAAGGAGAAGCAGTGAACAAAGAATCTCAAAGGAAGGTTAATTCTGCTTTTGTTGTTTCAACAAGTAGGCTCAATGATTGTGAAGCTGTTGTTCACATTTCCTCTTATGAGGTTCACAAGGCTCCACTATCCGAAATCTTGCACTGTTTAGAAAATAATGGCCTCTCTCTACTCAATGCTTCTTCCTCTGAAACCTTTGGAGGGAGGGTCTTCTACAACTTGCATTTCCAGGTGGAAAAAACTCATAGATTAGAGCCCGAGATTCTAACTGAGAAGCTTTTGTCAATATATGAGAAGCAAAGGATTTTCTGA 708 0.4308 MVALFSPPVFSAMEWLLEEEPLSYNERYLYKDDASSEFCSALEAQVEIGPSSPDPAMVKKLSHNASERDRRKKVNHLVSSLRSLLPLADQTKKMSIPATVSRVLKYIPELQQQVQGLTKKKEELLRRISRQLQGEAVNKESQRKVNSAFVVSTSRLNDCEAVVHISSYEVHKAPLSEILHCLENNGLSLLNASSSETFGGRVFYNLHFQVEKTHRLEPEILTEKLLSIYEKQRIF 235
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca03g01903 235 CDD bHLH_AtORG2_like 59 132 - -
Cca03g01903 235 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 58 110 IPR011598 GO:0046983
Cca03g01903 235 PANTHER ACHAETE-SCUTE TRANSCRIPTION FACTOR-RELATED 1 231 IPR015660 GO:0003700|GO:0006357
Cca03g01903 235 Gene3D - 54 144 IPR036638 GO:0046983
Cca03g01903 235 PANTHER TRANSCRIPTION FACTOR ORG2-RELATED 1 231 - -
Cca03g01903 235 Pfam Helix-loop-helix DNA-binding domain 59 111 IPR011598 GO:0046983
Cca03g01903 235 SMART finulus 64 116 IPR011598 GO:0046983
Cca03g01903 235 Coils Coil 107 127 - -
Cca03g01903 235 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 59 129 IPR036638 GO:0046983
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca03g01903 54 231 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G56970 51.381 1.57e-54 174
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Cca03g01903 HLH 2.5e-10 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca03g01903 - - gmx:100803424 348.591
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca03g01903 03 38590466 38592459 Cca03g01903 03 38590466 38592459 ECH