Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca03g01867 ATGGGACTGTGTCATGGAAAACCCATTGAAACCTCACAAAGTGAAGGTGGGCACCATGTTTTCCCTGGCGAGAAGGAGGTGGTGGCGAGTCCCAAAACCACCACAAAAGGTTCAAAGTTTCCGTTTTACAGCCCAAGTCCGTTGCCGAGCCTCTTCAAGAACTCGCCGGCGAACTCGAGCGTGAGTTCGACCCCTCTGCGCCTCTTCAAGCGCCCCTTTCCGCCGCCGTCGCCGGCGAAGCACATTCGGGCTCTGCTGGCCCGGCGCCACGGGTCCGTCAAGCCCAATGAGGCCTCCATCCCCGAAGGGAGTGAGTGTGAAGTTGGGCTGGACAAGAGCTTCGGCTTCTCCAACCACTTCCAGGCTCACTATGAGCTTGGACCCGAGGTGGGCCGTGGCCACTTTGGCTACACTTGCTCTGCCAAGGGGAAGAAAGGCACCTTCAAGGGCCATGATGTTGCTGTCAAAGTCATTCCAAAATCCAAGATGACAACAGCAATTGCTATTGAGGATGTAAGGAGAGAAGTAAAGATATTGCGAGCTCTGAGTGGGCATAAAAATTTGGTGCAATTCTACGAAGCCTATGAAGACAATGACAATGTTTATATAGTTATGGAGTTATGCAAAGGAGGTGAACTGCTAGATAAGATTCTTTCCAGGGGTGGAAAGTACTCAGAAGAAGATGCCAGAGTTGTTATGATTCAGATATTGAGTGTGGTAGCTTTTTGTCATCTGCAGGGTGTTGTTCACCGTGATCTGAAGCCAGAGAATTTTCTTTATGTTTCTAAGGATGAAAACTCCACTCTGAAGGTCATTGATTTTGGATTGTCTGACTATGTAAAGCCAGATGAAAGGCTGAATGACATTGTTGGAAGTGCATATTATGTAGCTCCTGAAGTTTTGCATAGATCTTACGGGACAGAAGCAGATATGTGGAGCATTGGTGTAATTGCTTATATTCTTTTATGTGGAAGCCGACCCTTTTGGGCCAGGACAGAATCTGGCATATTTCGGGCCGTCCTGAAGGCGGATCCAAGTTTTGATGAAGCTCCTTGGCCATCTTTATCAGCTAATGCAATAGATTTTGTAAAGAGACTGTTGAATAAGGATTATCGTAAAAGGCTAACTGCAGCTCAGGCTCTCAGTCACCCATGGCTCGCCAATCATTCTGATGATGTGAAGATACCTTTTGATATGATAATTCACAAGCTTGTTAAAGCTTATATATGCTCATCTTCATTACGCAAATCAGCATTAGGGGCCCTTGCTAAGACATTAACATTAGTGCAGCTAGCATATCTGAGAGAACAATTTAATATCTTAGGCCCGAACAAAAGTGGGTTAATCTCCATGCAGAACTTCAAGACGGGTATTTTAAGGAGTGCCACTGATGCCTCAAAGGATTCACGTGTCTTAGATTATGTGAACATGGTTAGTTCAATCCAATATCGGAAATTAGATTTTGAAGAATTTTGTGCTGCTGCTATAAGTGTCCATCAACTAGAGGGAATGGAAAGCTGGGAGCAACATGCAAGACGTGCCTATGAGTTGTTTGATAAGGAAGGAAATAGACCAATTATGATTGAAGAGCTTGCATCGGAACTTGGGCTTAGCCCATCAGTGCCTATTCATGTGGTACTCCAAGATTGGATAAGACACTCAGATGGGAAGCTTAGCTTCTTGGGGTTTGTTAGACTTCTGCATGGAGTTTCTTCTCGCACATTTCAGAAGGCTTGA 1737 0.4548 MGLCHGKPIETSQSEGGHHVFPGEKEVVASPKTTTKGSKFPFYSPSPLPSLFKNSPANSSVSSTPLRLFKRPFPPPSPAKHIRALLARRHGSVKPNEASIPEGSECEVGLDKSFGFSNHFQAHYELGPEVGRGHFGYTCSAKGKKGTFKGHDVAVKVIPKSKMTTAIAIEDVRREVKILRALSGHKNLVQFYEAYEDNDNVYIVMELCKGGELLDKILSRGGKYSEEDARVVMIQILSVVAFCHLQGVVHRDLKPENFLYVSKDENSTLKVIDFGLSDYVKPDERLNDIVGSAYYVAPEVLHRSYGTEADMWSIGVIAYILLCGSRPFWARTESGIFRAVLKADPSFDEAPWPSLSANAIDFVKRLLNKDYRKRLTAAQALSHPWLANHSDDVKIPFDMIIHKLVKAYICSSSLRKSALGALAKTLTLVQLAYLREQFNILGPNKSGLISMQNFKTGILRSATDASKDSRVLDYVNMVSSIQYRKLDFEEFCAAAISVHQLEGMESWEQHARRAYELFDKEGNRPIMIEELASELGLSPSVPIHVVLQDWIRHSDGKLSFLGFVRLLHGVSSRTFQKA 578
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca03g01867 578 SUPERFAMILY EF-hand 416 569 IPR011992 -
Cca03g01867 578 Gene3D Phosphorylase Kinase; domain 1 120 210 - -
Cca03g01867 578 Gene3D - 407 496 - -
Cca03g01867 578 PANTHER SERINE/THREONINE-PROTEIN KINASE 28 573 - -
Cca03g01867 578 MobiDBLite consensus disorder prediction 1 40 - -
Cca03g01867 578 SMART serkin_6 124 386 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cca03g01867 578 CDD STKc_CAMK 123 385 - -
Cca03g01867 578 Gene3D - 412 566 - -
Cca03g01867 578 SUPERFAMILY Protein kinase-like (PK-like) 123 407 IPR011009 -
Cca03g01867 578 ProSitePatterns Serine/Threonine protein kinases active-site signature. 248 260 IPR008271 GO:0004672|GO:0006468
Cca03g01867 578 ProSitePatterns Protein kinases ATP-binding region signature. 130 156 IPR017441 GO:0005524
Cca03g01867 578 Gene3D Transferase(Phosphotransferase) domain 1 211 405 - -
Cca03g01867 578 ProSiteProfiles Protein kinase domain profile. 124 386 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cca03g01867 578 Pfam Protein kinase domain 124 386 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cca03g01867 578 PANTHER CDPK-RELATED KINASE 1 28 573 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca03g01867 Cca-Chr3 38028334 38035066 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca03g01867 1 576 EF-hand Containing Proteins AT3G50530 66.878 0.0 848
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Cca03g01867 Pkinase 3.2e-70 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca03g01867 - - gmx:100803625 1088.94
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca03g01867 03 38028334 38035066 Cca03g01867 03 38028334 38035066 ECH