Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca03g01842 ATGGGGAGAGTGAAGCTTGAGATCCAAAAGATTGAGAACACAACAAATAGGCAAGGAGGAATGGTCTTATCAAGAAAGCTTACGAACTTCCTGTTCTTTGTGATGTTGATGTCGCTCTCACCATCGATCTTTTCCCCATCTGGAACACCCTCTTTCTTCTCCACCAACAAAAAAGAACGATGCGTTAATCCTCCGGAGGGTGAACGCAGAAGAGTTCCCAGCCACGTTGATTAA 234 0.4487 MGRVKLEIQKIENTTNRQGGMVLSRKLTNFLFFVMLMSLSPSIFSPSGTPSFFSTNKKERCVNPPEGERRRVPSHVD 77
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca03g01842 77 MobiDBLite consensus disorder prediction 61 77 - -
Cca03g01842 77 ProSiteProfiles MADS-box domain profile. 1 18 IPR002100 GO:0003677|GO:0046983
Cca03g01842 77 MobiDBLite consensus disorder prediction 55 77 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca03g01842 1 69 Type I MADS-box Gene Family AT1G22130 38.272 1.08e-06 42.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca03g01842 - - pvu:PHAVU_009G069300g 49.2914