Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca03g01840 ATGGATCATCATGAACAAAAGCATTTCATTGATAGAACTAACATCAAGGCTATTTTAATGGATATGTTTGCTGCATCATTTGACACTTCTGCTGTTGCGATTGAGTGGGCTATGTCAGAACTCCTAAGGCACCCAAGGGTGATGAAGAAACTTCAAGATGAGTTAACAAATGTAGTGGGAATAAATAGGGTGGTGGAGGAGTCTGACTTAACAAAGTTGTCATATTTGAACATGGTAGTGAAAGAGACCTTACGGTTGTATCCGGTTGGACCCTTGCTAATTCCTCGTGAGTCCTTAGAAGATATCACAATTAACGGATATTTCATAAAGAAAAAGTCAAGAATTTTAATCAATGCATGGACAATTGGACGAGATCCTAAGGTTTGGTCAGATAATGCTGAGATATTTTATCCAGAGAGATTTGTGAACAACGATATAGATATTAGAGGACATGACTTTCAACTTATACCATTTGGTTCTGGCCGCAGAGGATGTCCTGGGATACAATTGGGTCTAATTACTTTTAGTCTTGTTCTGGCTCAATTAGTGCATTGCTTCAATTGGGAGCTTCCATCTGGTATCTCTCCTAATGACTTAGATATGACTGAAAAATTTGGTCTTTCCTTACCAAGAAGTAATCACTTGTTAGCAGTACCATCTTATCGCCTATTGAATACAGCTTAA 684 0.3801 MDHHEQKHFIDRTNIKAILMDMFAASFDTSAVAIEWAMSELLRHPRVMKKLQDELTNVVGINRVVEESDLTKLSYLNMVVKETLRLYPVGPLLIPRESLEDITINGYFIKKKSRILINAWTIGRDPKVWSDNAEIFYPERFVNNDIDIRGHDFQLIPFGSGRRGCPGIQLGLITFSLVLAQLVHCFNWELPSGISPNDLDMTEKFGLSLPRSNHLLAVPSYRLLNTA 227
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca03g01840 227 Gene3D Cytochrome P450 1 218 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca03g01840 227 PRINTS P450 superfamily signature 156 165 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca03g01840 227 PRINTS P450 superfamily signature 78 89 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca03g01840 227 PRINTS P450 superfamily signature 25 42 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca03g01840 227 PRINTS E-class P450 group I signature 14 31 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca03g01840 227 PRINTS E-class P450 group I signature 34 60 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca03g01840 227 PRINTS E-class P450 group I signature 77 95 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca03g01840 227 PRINTS E-class P450 group I signature 155 165 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca03g01840 227 PRINTS E-class P450 group I signature 165 188 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca03g01840 227 Pfam Cytochrome P450 9 214 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca03g01840 227 PANTHER FLAVONOID 3'-MONOOXYGENASE-RELATED 3 223 - -
Cca03g01840 227 PANTHER CYTOCHROME P450 FAMILY PROTEIN 3 223 - -
Cca03g01840 227 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 158 167 IPR017972 GO:0005506|GO:0016705
Cca03g01840 227 SUPERFAMILY Cytochrome P450 6 218 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca03g01840 Cca-Chr3 37754965 37755648 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca03g01840 10 224 Monolignol Biosynthesis Gene Families AT4G36220 51.852 7.04e-78 241
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca03g01840 - - ccaj:109796332 461.07