Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca03g01815 ATGGTGGAGCGAGAGCACGGTAACAATATGAATATGCTGATATTCAGGTCCCTTCTAATAGCTTTGCTGCTAGTTTTCTCTAGCAGACACACCATAGCAGAAAAGAAAACCCCTCACTCTAAAACCACATACATAGTTCACATGGACAAGCTCAACATGCCAGCAAATTTCAACGACCATCTGCTGTGGTATGATTCATCTCTAAATTCAGTATCAGACTCCGCAGAGATGCTCTACACATACAATCATGTAGCTCATGGCTTCTCCACAAGGCTAACTACCCAAGAAGCTGAGTTACTGTCAAAACAACTGGGAGTTCTCTCTGTCACCCCAGAAGTTAGATATGATCTTCACACAACTCGATCACCAGAGTTTCTGGGGTTGGAAAGAACCACCACTCTTTCACTACCCTATGGAAAGCAGAGCGAGGTGGTTGTTGGAGTACTAGACACTGGTGTGTGGCCTGAACTAAAAAGCTTTGATGACACAGGACTTGGGCCAGTACCGAGTAGCTGGAAAGGTGAGTGTGAGAGAGGTAAGAACTTCAACCCATCAAACTGTAACAAGAAGCTTGTTGGTGCAAGGTTTTTCTCCAAGGGCTACGAGGCGGCGTTTGGACCGATTGATGAAAAGACAGAATCAAAGTCACCAAGGGATGATGATGGCCATGGAAGTCACACCTCAACTACAGCCGCAGGTTCTGCAGTTCCAGGAGCCAGCCTCTTTGGTTTCGCTAATGGGACAGCAAGAGGTATGGCCACACAAGCCAGAGTTGCTACTTACAAAGTGTGTTGGCTTGGAGGGTGCTTCACATCAGACATAGCTGCTGGCATTGACAAGGCCATTGGAGATGGTGTCAACATTCTTTCCATGTCTATTGGTGGAGGTTTGACGGATTACTACAAAGACACTATTGCAATTGGAACTTTTGCAGCCACAGCCCATGGAATACTGGTTTCCAATTCAGCAGGAAATGGTGGGCCTAGTCAAGCATCTTTGTCTAATGTGGCGCCATGGCTTACCACAGTGGGTGCTGGAACCATAGACCGTGACTTCCCTTCCTATATCACCCTTGGAAATGGGAAGATATACACTGGGGTGTCCCTTTACCACGGCAAATTGCCACCTAATTCTCCACTACCAATTGTTTATGCTGGCAATGCAAGCGATGAATCCGAGGGAAATCTTTGCAGCAAAGGTAGTTTGATTCCTGAAAAAGTAGCAGGAAAAATTGTTATATGTGATCGAGGAGGGACTGCTAGAGTGGAAAAGGGTTTGGTGGTGAAGAGTGCTGGAGGCATTGGGATGATACTAGCAAACAATGACGACTATGGAGAAGAGCTAGTTGCTGACTCTTATCTCCTCCCAGCTTTAGCATTGGGTCAGAAATTCAGCAATGAGTTAAAGAAGTATGTTTTCTCAGCTCCTAATCCGACAGCTAAAATTGCATTTGGTGGCACCAAGTTAGGGGTTGAACCATCCCCAGTGGTGGCAGCTTTCAGCTCAAGAGGGCCAAATTTGCTCACTCCGAAAGTACTCAAACCAGACCTGATAGCTCCGGGAGTCAACATCCTAGCTGGGTGGACTGGTGCAATTGGACCAACTGGCTTGACTGAAGATACCAGGCATGTGGAATTCAACATAATCTCAGGCACATCCATGTCCTGTCCCCATGTCAGTGGGTTAGCTTCCCTTCTTAAGGGCACTCACCCTGAATGGAGCCCTGCAGCTATAAGGTCTGCCCTCATGACCACATCCTACAGAACCTACAAAAATGGGCAAACCATAAGAGATGTTGCCACTGGCCTGCCGGCTACACCGTTTGATTATGGGGCTGGACATGTGGATCCAGTAGCTGCTTTTGATCCTGGCCTTGTGTATGATGCTACCGTGGATGACTACTTGAGCTTCTTCTGTGCCTTGAACTATACTTCCAATCAAATAAAGCTTGTAGCAAAAAGAGATTTTACCTGCAGCAAAAGGAAGAAGTACAGAGTGGAGGATCTCAACTACCCATCTTTTGCTGTTCCTTTTGACACGGCTTATGGAGTGAAGGGTGGTTCTCACAAACGATTGAACCCAAACACTCTACAGTATACAAGGACTTTAACAAATGTGGGCGCCCCTGCAACATATAAAGTTTCAGTGTCGCAGTCCCCCACAGTGAATATTGTGGTGCAACCACAAACACTTAGTTTCAGGGAACTAAATGAGAGGAAGAACTACACAGTGACGTTCACGTCTTCTTCAAAGCCTTCTGGAACAGCCAGCTTTGCTTATCTGGAATGGTCAGATGGGAAACATAAGGTCACTAGTCCCATTGCTTTTAGCTGGACTTGA 2340 0.4641 MVEREHGNNMNMLIFRSLLIALLLVFSSRHTIAEKKTPHSKTTYIVHMDKLNMPANFNDHLLWYDSSLNSVSDSAEMLYTYNHVAHGFSTRLTTQEAELLSKQLGVLSVTPEVRYDLHTTRSPEFLGLERTTTLSLPYGKQSEVVVGVLDTGVWPELKSFDDTGLGPVPSSWKGECERGKNFNPSNCNKKLVGARFFSKGYEAAFGPIDEKTESKSPRDDDGHGSHTSTTAAGSAVPGASLFGFANGTARGMATQARVATYKVCWLGGCFTSDIAAGIDKAIGDGVNILSMSIGGGLTDYYKDTIAIGTFAATAHGILVSNSAGNGGPSQASLSNVAPWLTTVGAGTIDRDFPSYITLGNGKIYTGVSLYHGKLPPNSPLPIVYAGNASDESEGNLCSKGSLIPEKVAGKIVICDRGGTARVEKGLVVKSAGGIGMILANNDDYGEELVADSYLLPALALGQKFSNELKKYVFSAPNPTAKIAFGGTKLGVEPSPVVAAFSSRGPNLLTPKVLKPDLIAPGVNILAGWTGAIGPTGLTEDTRHVEFNIISGTSMSCPHVSGLASLLKGTHPEWSPAAIRSALMTTSYRTYKNGQTIRDVATGLPATPFDYGAGHVDPVAAFDPGLVYDATVDDYLSFFCALNYTSNQIKLVAKRDFTCSKRKKYRVEDLNYPSFAVPFDTAYGVKGGSHKRLNPNTLQYTRTLTNVGAPATYKVSVSQSPTVNIVVQPQTLSFRELNERKNYTVTFTSSSKPSGTASFAYLEWSDGKHKVTSPIAFSWT 779
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca03g01815 779 Gene3D Peptidase S8/S53 domain 144 634 IPR036852 GO:0004252|GO:0006508
Cca03g01815 779 Gene3D - 349 490 - -
Cca03g01815 779 CDD PA_subtilisin_like 355 482 - -
Cca03g01815 779 Pfam Peptidase inhibitor I9 43 118 IPR010259 -
Cca03g01815 779 Pfam Subtilase family 142 597 IPR000209 GO:0006508|GO:0008236
Cca03g01815 779 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 30 777 IPR045051 -
Cca03g01815 779 SUPERFAMILY PA domain 380 444 IPR046450 -
Cca03g01815 779 SUPERFAMILY Subtilisin-like 117 625 IPR036852 GO:0004252|GO:0006508
Cca03g01815 779 ProSiteProfiles Serine proteases, subtilase domain profile. 114 621 - -
Cca03g01815 779 Gene3D - 638 778 - -
Cca03g01815 779 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 26 118 IPR037045 -
Cca03g01815 779 MobiDBLite consensus disorder prediction 208 225 - -
Cca03g01815 779 MobiDBLite consensus disorder prediction 208 232 - -
Cca03g01815 779 PANTHER SUBTILISIN-LIKE SERINE PROTEASE 30 777 - -
Cca03g01815 779 CDD Peptidases_S8_3 115 587 IPR034197 -
Cca03g01815 779 Pfam PA domain 381 467 IPR003137 -
Cca03g01815 779 PRINTS Subtilisin serine protease family (S8) signature 141 160 IPR015500 -
Cca03g01815 779 PRINTS Subtilisin serine protease family (S8) signature 219 232 IPR015500 -
Cca03g01815 779 PRINTS Subtilisin serine protease family (S8) signature 550 566 IPR015500 -
Cca03g01815 779 ProSitePatterns Serine proteases, subtilase family, serine active site. 551 561 IPR023828 -
Cca03g01815 779 Pfam Fibronectin type-III domain 668 775 IPR041469 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca03g01815 Cca-Chr3 37378223 37381302 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca03g01815 10 779 Subtilisin-like Serine Gene Family AT5G67360 64.036 0.0 996
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca03g01815 - - gmx:100794284 1382.85
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca03g01815 03 37378223 37381302 Cca03g01815 03 37378223 37381302 ECH