Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca03g01810 ATGCGAGTTGTGTGTTGCTCCAATTCGTCGTTAGCCGTCACTGCCACTCTTCCATCTTTTCCCTGTCTGGGTCCTAGATTCCTTCCACGCATAGCAATTCCAATTTCAATACCATCCTCTGCTATCCGCTTTCTTCCCCTCCGCTCCACTGCTTCGCCGAGACAAATCACAACAATGGCTTCCAAGAATGCTCAAGATCAACAAGACTCGCGCTTAGAGAGTATCTCCTCCGCAATCCGAGTCATCCCCGACTTTCCTAAGCCAGGAATTATGTTTCAGGATATAACCACGCTGCTTCTTGATACAAAGGCTTTCAAAGACACGATTGACTTGTTTGTTGAGAGGTACAGAGATAAAAATATTTCTGTTGTCGCAGGCATCGAAGCAAGAGGCTTTATATTTGGACCACCCATTGCATTAGCTATTGGAGCAAAATTTGTCCCCATGAGGAAACCCAATAAATTGCCAGGGGAGGTTATCTCGGAAGAGTATTCATTGGAGTATGGAACAGACAAAATGGAGATGCATGTTGGGGCTGTACAACCTGGAGATCGAGCCTTAATCATAGATGATCTTATCGCCACCGGAGGGACGTTGGGTGCTGCAATTAAGCTACTAGAACGTGTTGGGGTGCATGTTGTGGAGTGTGCTTGTGTGATTGAATTACCAGAGTTAAAGGGGCGTGATAGGCTGGGAGACAAGCCGCTATTTGTCTTGGTTAAAGGGATGGCCTGA 735 0.4653 MRVVCCSNSSLAVTATLPSFPCLGPRFLPRIAIPISIPSSAIRFLPLRSTASPRQITTMASKNAQDQQDSRLESISSAIRVIPDFPKPGIMFQDITTLLLDTKAFKDTIDLFVERYRDKNISVVAGIEARGFIFGPPIALAIGAKFVPMRKPNKLPGEVISEEYSLEYGTDKMEMHVGAVQPGDRALIIDDLIATGGTLGAAIKLLERVGVHVVECACVIELPELKGRDRLGDKPLFVLVKGMA 244
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca03g01810 244 PANTHER ADENINE PHOSPHORIBOSYLTRANSFERASE 67 241 - -
Cca03g01810 244 Hamap Adenine phosphoribosyltransferase [apt]. 75 242 IPR005764 GO:0003999|GO:0005737|GO:0006168
Cca03g01810 244 Pfam Phosphoribosyl transferase domain 101 236 IPR000836 -
Cca03g01810 244 SUPERFAMILY PRTase-like 76 236 IPR029057 -
Cca03g01810 244 CDD PRTases_typeI 109 241 IPR000836 -
Cca03g01810 244 TIGRFAM apt: adenine phosphoribosyltransferase 76 240 IPR005764 GO:0003999|GO:0005737|GO:0006168
Cca03g01810 244 PANTHER ADENINE PHOSPHORIBOSYL TRANSFERASE, PHOSPHORIBOSYLTRANSFERASE-LIKE PROTEIN-RELATED 67 241 - -
Cca03g01810 244 Gene3D - 62 241 IPR029057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca03g01810 Cca-Chr3 37322586 37327396 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca03g01810 65 244 PRT Gene Family AT1G27450 81.667 4.19e-107 305
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca03g01810 K00759 - gmx:100777103 394.045
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca03g01810 03 37322586 37327396 Cca03g01810 03 37322586 37327396 ECH