Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca03g01784 ATGATAGAGGATACTAATCCGCTGTATGCAAATTTCAATGGTCATGTTTCCGTTGTATTTCAGGTGTTGGGACTTGGGGCTGCTGGGCTAGGCTGGTGTGTGATCTTGCATCTCGACAAGAGATGCAACAAACCGAAAATCTTTTTGTCATGTCGAAGAGATGCCAGAGGAAGAAGCAGTGGCATTGCAAGACGCCATCGGACAAGACTGCCTAAGATTGAAACTCTTCTTAAAGGTAAAGCTTGCTCTGGAATAAAAGAAACTGCAACTAGTTTGACAAAACATCTTGCACAAAGAGCTCAGGAGACCTTTGAAGAATTTGAAGTGGAAATCGAGAAAGATGCTATAAAGACTGCAGTAACAGATGGAACTGTCCATCCTTTGACACGCTCTGTGATTAACTATGTGAGCTATCAATCCACTTTGATGCAGCTTTTTCTGGAATTTGAGAGTGATGGGTTTGGAGGTCTGAGGCCAAGGATTTGCTGGGGGATGACTGAAGCCAACGACATAGGAGGATTGTTCAACAGCATGCAAATCAATAAAAAAGAAATGCTTGGGCAAAGGTCTTGTTCTAGTGACCTTGCTGACCATTACATGTCTTGCAGCTTTCTTAGATGTCACTTGGATAATGCCTCTTCTGTTCTTGGTCTGAGGCCAAGGATTTGCTAG 672 0.4315 MIEDTNPLYANFNGHVSVVFQVLGLGAAGLGWCVILHLDKRCNKPKIFLSCRRDARGRSSGIARRHRTRLPKIETLLKGKACSGIKETATSLTKHLAQRAQETFEEFEVEIEKDAIKTAVTDGTVHPLTRSVINYVSYQSTLMQLFLEFESDGFGGLRPRICWGMTEANDIGGLFNSMQINKKEMLGQRSCSSDLADHYMSCSFLRCHLDNASSVLGLRPRIC 223
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca03g01784 223 PANTHER EXOCYST COMPLEX PROTEIN EXO70 72 153 IPR004140 GO:0000145|GO:0006887
Cca03g01784 223 Pfam Exo70 exocyst complex subunit 70 146 IPR046364 GO:0000145|GO:0005546|GO:0006887
Cca03g01784 223 PANTHER EXOCYST COMPLEX COMPONENT EXO70A1-LIKE 72 153 - -
Cca03g01784 223 Gene3D Exocyst complex component Exo70 65 216 - -
Cca03g01784 223 SUPERFAMILY Cullin repeat-like 70 151 IPR016159 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca03g01784 Cca-Chr3 37050537 37056504 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca03g01784 72 149 EXO70 exocyst subunit family AT5G03540 67.073 1.96e-27 107
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca03g01784 K07195 - ccaj:109788676 282.722