Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca03g01783 ATGCAACTCTCCTCTCTCATTTCCACTCTCGAGAGTCACTCTCTTCTCTTACGCTTCATTCGTTTCCAGTGTCAAGATTCTCTTTTCGAAGAAAACGGTGGACATGAATTTTACCGTACCTCGCTGGTGACCTTCTTTGAAAGGGTTTTTCTTTTTGTGCGGTGCAAAGACCGGTGGATATGGATATTACAGTTTCTCAATCTGGTGACGTTGTGTAGATGGAAGGGTTTTTCTCTTTGTTCCTCACTCCGGATCTGTAACAGTGCACATAATGGAAGCTTGAAAACAAATTTAGAAGGAAGATCAAAGCAGTATAAAGACCTTGCATTGACATATCTTTTTCTCATGAACAATGTTCATTATATTGTCAGATTAGTTTGGAGGTCTGAAGACAATGATTTGCTAAGATTCTTCCGTTGCTTATCTATTCAGGGCCTTAGCTCATCAGGTGGTGGGAGTGGTACTGGTGGCAGTGATGGTGGAACTGGAAGCAGTAGTGGTGCTTCATTAAGGACAGGCAAAGCTTGCTCTGGAATAAAAGAAGCTGCAACTAGTTTGACAAAACATCTTGCACAAAGAACCCAGGAGACCTTTGAAGAATTTGAAGTGGCAATCCAGAAAGATGCTAGAAAGACTGCAGTTATAGATGGAACTGTCCATCCTTTGACACGCTCTGTGATTAACTATCTATCAATCCACCTTGAAGCAACTTTTTCTGGATTTTGA 726 0.4132 MQLSSLISTLESHSLLLRFIRFQCQDSLFEENGGHEFYRTSLVTFFERVFLFVRCKDRWIWILQFLNLVTLCRWKGFSLCSSLRICNSAHNGSLKTNLEGRSKQYKDLALTYLFLMNNVHYIVRLVWRSEDNDLLRFFRCLSIQGLSSSGGGSGTGGSDGGTGSSSGASLRTGKACSGIKEAATSLTKHLAQRTQETFEEFEVAIQKDARKTAVIDGTVHPLTRSVINYLSIHLEATFSGF 241
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca03g01783 241 Gene3D Exocyst complex component Exo70 84 144 - -
Cca03g01783 241 SUPERFAMILY Cullin repeat-like 93 135 IPR016159 -
Cca03g01783 241 PANTHER EXOCYST COMPLEX COMPONENT EXO70A1-LIKE 93 135 - -
Cca03g01783 241 PANTHER EXOCYST COMPLEX COMPONENT EXO70A1-LIKE 168 232 - -
Cca03g01783 241 MobiDBLite consensus disorder prediction 148 169 - -
Cca03g01783 241 Gene3D Exocyst complex component Exo70 164 237 - -
Cca03g01783 241 SUPERFAMILY Cullin repeat-like 176 232 IPR016159 -
Cca03g01783 241 Pfam Exo70 exocyst complex subunit 170 232 IPR046364 GO:0000145|GO:0005546|GO:0006887
Cca03g01783 241 Pfam Exo70 exocyst complex subunit 93 135 IPR046364 GO:0000145|GO:0005546|GO:0006887
Cca03g01783 241 PANTHER EXOCYST COMPLEX PROTEIN EXO70 93 135 IPR004140 GO:0000145|GO:0006887
Cca03g01783 241 PANTHER EXOCYST COMPLEX PROTEIN EXO70 168 232 IPR004140 GO:0000145|GO:0006887
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca03g01783 Cca-Chr3 37039556 37043222 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca03g01783 173 230 EXO70 exocyst subunit family AT5G03540 67.241 7.87e-19 83.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca03g01783 K07195 - ccaj:109788676 105.916