Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca03g01782 ATGGAAATGAAAAGACTTGCATCTCAAATGATTCAGATTATGTTTCTGACAGCCTTGATGCTTGAAGTAGCTGATACACATGTTTCTCCTGATGATGTGGATGATTACACTTACAGAGATGATTTTTTAATGCGAAGAGAATTGTCAGCTAAGTTCCTAGAAAATGATATGGATGTCGTTCAAAATGTGGATAACTCATATGGAGAGATGTACAGCCCCTGGCCATTTGCTGCCCTTGCCAACCATACAGCTGCCCTTTTCTCAATGAAGCAGTATGATACTTGTGAAATTGTCGCAGTGAAGATGGCAAGACTTCGTAAATTGAAGCAACCGTTGGATATGAATATTAGGGTTCTTCGCACTGGTATGGAAGGTTTTTTTTCCATACTTCCTGCAACTGACCTTGTTCCTGGGAATATTGTGGAAGTTTCTGTGAGGCGTAAAGTTCCCTCTGATAAGAGGATGATTGAGATGCTAAGCAATCAAGTGTGCGTTGATCAAGCTATTCTTCCGGCTGTCACTAGTGCATTAATGGTCCACCACAAAGACTATCTAAAAGAAGATGCTGTTGATCTAATGAGCAGCCTTAATGGTCCCAGATATGCATTATGGGAGAGAACTGAGTGGGAAGATAAAAACCGTTACACCATTGTAGATACCGATGATATCTACAAGTCATCATTCGTTTGGGTTCTTCTCCCTTCGAAGTTCAAATGGCCACAGAGAAATAAGAGTCTGACGATGCAAAGAAGCCAGAGAACACAGAAAAGAGAATTGGGTTCAAGCTTTCCCCAGCCCCTTTCCGTTGTATTCCAGAATTGTTTTCTGTCACATGGTTTAATTTGA 846 0.409 MEMKRLASQMIQIMFLTALMLEVADTHVSPDDVDDYTYRDDFLMRRELSAKFLENDMDVVQNVDNSYGEMYSPWPFAALANHTAALFSMKQYDTCEIVAVKMARLRKLKQPLDMNIRVLRTGMEGFFSILPATDLVPGNIVEVSVRRKVPSDKRMIEMLSNQVCVDQAILPAVTSALMVHHKDYLKEDAVDLMSSLNGPRYALWERTEWEDKNRYTIVDTDDIYKSSFVWVLLPSKFKWPQRNKSLTMQRSQRTQKRELGSSFPQPLSVVFQNCFLSHGLI 281
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca03g01782 281 SUPERFAMILY Calcium ATPase, transduction domain A 120 170 IPR008250 -
Cca03g01782 281 Gene3D - 105 170 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca03g01782 Cca-Chr3 37006046 37020430 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca03g01782 118 170 Primary Pumps ATPases(2) AT1G10130 67.925 5.70e-13 67.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca03g01782 K05853 - ccaj:109788680 195.282