Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca03g01737 ATGATTTTTATTCAGGATCTCTGGCCACTGCTCCAGCACATCGTTGGGAAAATAACTCCTACTTCCTCATCAGAAAAACCCGAATCCATGACCAACTCCACCTGCGCCGGCCATGACTCTGACCTCTGCCGAGACGACTCCGCCGCGCTCGTCCTCAAATTCGTCGCCATCGCCTCCATCCTCCTCGCCGGCATGGCAGGAATCGCCATCCCGCTCGTCGGACGCCACCGCCGCTTCCTCCGCACCGACGGCAACCTCTTCGTGGCTGCCAAGGCCTTCGCCGCCGGAGTCATCCTGGCCACGGGATTCGTCCACATGCTCTCCGACGCCTCCGAAGCGCTCCAGCACCCCTGCCTCCCTCCCTTCCCGTGGTCCAAGTTCCCCTTCACCGGCTTCTTCGCCATGGTGGCTGCTCTCTTGACGCTCCTCCTCGATTTCCTTGGAACGCAGTACTACGAGCGCAAGCAGGGACTCAACCGCTCCTCCGACGAACAAGCGCGGGTGGGCTCCTCCGATTCCGTCAAGGTCTTCGGGGAAGAGGAAAGCGGCGGAATGCACATCGTTGGGATGCATGCACATGCCGCGCATCACAGGCACAACCACCCCCATGGCCATGACGCATGTCATGGCAATGCAACCGTCAAGGAACAAGTCCACTCCCACATGGACGATGGGGAAGAAACTGACCTTCGACACGTCGTCGTTTCGCAGGTGTTGGAGCTTGGAATCGTATCTCATTCGGTGATAATAGGGTTGTCTCTAGGTGTTTCTCAGAGTCCTTGTACCATACGCCCTCTGATTGCGGCGTTATCCTTTCATCAGTTCTTTGAAGGCTTTGCGCTTGGAGGCTGCATTTCTCAAGCGCAGTTCAAGGCCTCCTCGGCAACCATAATGGCTTGTTTTTTTGCGCTCACTACACCCTTGGGTGTTGCCATTGGGACGGCCATTTCTTCCGGCTATAACCCTTACAGCCCCGCTGCACTCATTGCCGAAGGCATCTTGGATTCCTTGTCCTCGGGGATTTTAGTGTATATGGCTTTGGTAGATTTGATTGCTGCGGATTTTCTTAGCAAGAGAATGAGTTGTAACTTTAGGTTGCAGATACTTTCTTATTCTATGCTTTTCCTTGGGGCTGGCTTGATGTCTTCCCTCGCAATTTGGGCTTGA 1167 0.5527 MIFIQDLWPLLQHIVGKITPTSSSEKPESMTNSTCAGHDSDLCRDDSAALVLKFVAIASILLAGMAGIAIPLVGRHRRFLRTDGNLFVAAKAFAAGVILATGFVHMLSDASEALQHPCLPPFPWSKFPFTGFFAMVAALLTLLLDFLGTQYYERKQGLNRSSDEQARVGSSDSVKVFGEEESGGMHIVGMHAHAAHHRHNHPHGHDACHGNATVKEQVHSHMDDGEETDLRHVVVSQVLELGIVSHSVIIGLSLGVSQSPCTIRPLIAALSFHQFFEGFALGGCISQAQFKASSATIMACFFALTTPLGVAIGTAISSGYNPYSPAALIAEGILDSLSSGILVYMALVDLIAADFLSKRMSCNFRLQILSYSMLFLGAGLMSSLAIWA 388
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca03g01737 388 TIGRFAM zip: ZIP zinc/iron transport family 35 388 IPR004698 GO:0005385|GO:0016021|GO:0071577
Cca03g01737 388 PANTHER ZINC/IRON TRANSPORTER 30 388 - -
Cca03g01737 388 PANTHER ZIP ZINC/IRON TRANSPORT FAMILY PROTEIN 30 388 - -
Cca03g01737 388 Pfam ZIP Zinc transporter 52 385 IPR003689 GO:0016020|GO:0030001|GO:0046873|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca03g01737 Cca-Chr3 36489472 36491335 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca03g01737 29 388 Inorganic Solute Cotransporters AT1G10970 72.507 0.0 506
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca03g01737 K14709 - gmx:100812212 636.336
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca05g00833 05 22903255 22907911 Cca03g01737 03 36489472 36491335 PCT