Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca03g01732 ATGAGCGCAGAGGATGATGACCCAGAAAGGAAAAAATTGAAAGCGTGGAATTATGGGGTGAAGACCTTCCAGCGCGATCTGATGGCAGGGGCGGTGATGGGTGGAGTGGTGCACACGATTGTGGCCCCAATTGAGAGGGCGAAGCTATTGCTGCAGACTCAGGAGAGCAATTTGGCGATTGTCGCGAGTGGGCGTCGCAGATTCAAGGGCATGTTTGATTGCATACTCCGTACGGTCAGAGAAGAAGGCATTCTCTCTTTGTGGCGTGGCAATGGCAGCAGTGTTCTTCGTTACTATCCTTCTGTGGCGCTCAATTTCTCTCTCAAGGATCTTTACAGAAGCATGTTAAGAGATGGTGGAACCTATGGTGATAATAGTCTTTTGTCAGGTGCTACTGCTAATTTCGCTGCGGGGGCTGCTGCTGGCTGTACAACTCTTGTGCTGGTATACCCCCTTGATATAGCACACACACGCCTTGCTGCCGATATTGGAAAGACAGAAGTGCGCCAATTTCGAGGTATTTACCACTTCTTGGCTACCATATTTCACAAGGACGGCATTCGGGGGATCTATAGGGGCCTTCCTGCATCTCTACAAGGGATGGTGGTACACAGAGGCCTGTATTTTGGAGGCTTTGATACCATGAAAGAAATCTTGTCACAAGAACCAAAACCTGAGTTGGCACTGTGGAAGCGTTGGATGGTAGCTCAGGCAGTCACAACCTCTGCCGGGTTGATATCTTATCCCTTAGACACAGTTCGTAGGAGGATGATGATGCAGTCTGGCATGGAAAAGCCAGTGTACAATAGCACCCTGGACTGTTGGAGGAAGATTTATATGACAGAGGGGTTGGCTTCATTTTACCGTGGTGCAGTTTCAAATATGTTTAGGAGCACAGGAGCAGCAGCTATCTTAGTCTTGTATGATGAGGTCAAGAAATTTATGAACTGGGGGGCATTTTAA 963 0.4839 MSAEDDDPERKKLKAWNYGVKTFQRDLMAGAVMGGVVHTIVAPIERAKLLLQTQESNLAIVASGRRRFKGMFDCILRTVREEGILSLWRGNGSSVLRYYPSVALNFSLKDLYRSMLRDGGTYGDNSLLSGATANFAAGAAAGCTTLVLVYPLDIAHTRLAADIGKTEVRQFRGIYHFLATIFHKDGIRGIYRGLPASLQGMVVHRGLYFGGFDTMKEILSQEPKPELALWKRWMVAQAVTTSAGLISYPLDTVRRRMMMQSGMEKPVYNSTLDCWRKIYMTEGLASFYRGAVSNMFRSTGAAAILVLYDEVKKFMNWGAF 320
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca03g01732 320 Gene3D Mitochondrial carrier domain 25 317 IPR023395 -
Cca03g01732 320 PRINTS Adenine nucleotide translocator signature 23 35 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Cca03g01732 320 PRINTS Adenine nucleotide translocator signature 68 89 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Cca03g01732 320 PRINTS Adenine nucleotide translocator signature 101 113 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Cca03g01732 320 PRINTS Adenine nucleotide translocator signature 129 142 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Cca03g01732 320 PRINTS Adenine nucleotide translocator signature 232 248 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Cca03g01732 320 Pfam Mitochondrial carrier protein 22 117 IPR018108 -
Cca03g01732 320 Pfam Mitochondrial carrier protein 131 221 IPR018108 -
Cca03g01732 320 Pfam Mitochondrial carrier protein 228 316 IPR018108 -
Cca03g01732 320 PRINTS Mitochondrial carrier protein signature 26 39 IPR002067 GO:0055085
Cca03g01732 320 PRINTS Mitochondrial carrier protein signature 39 53 IPR002067 GO:0055085
Cca03g01732 320 PRINTS Mitochondrial carrier protein signature 90 110 IPR002067 GO:0055085
Cca03g01732 320 PRINTS Mitochondrial carrier protein signature 144 162 IPR002067 GO:0055085
Cca03g01732 320 PRINTS Mitochondrial carrier protein signature 191 209 IPR002067 GO:0055085
Cca03g01732 320 PRINTS Mitochondrial carrier protein signature 236 258 IPR002067 GO:0055085
Cca03g01732 320 ProSiteProfiles Solute carrier (Solcar) repeat profile. 231 314 IPR018108 -
Cca03g01732 320 PANTHER ADP,ATP CARRIER PROTEIN-RELATED 19 319 - -
Cca03g01732 320 ProSiteProfiles Solute carrier (Solcar) repeat profile. 129 218 IPR018108 -
Cca03g01732 320 ProSiteProfiles Solute carrier (Solcar) repeat profile. 21 115 IPR018108 -
Cca03g01732 320 SUPERFAMILY Mitochondrial carrier 22 310 IPR023395 -
Cca03g01732 320 PANTHER ADP,ATP CARRIER PROTEIN 1-RELATED-RELATED 19 319 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca03g01732 Cca-Chr3 36450249 36455278 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca03g01732 23 317 Antiporters AT5G17400 38.284 3.78e-63 201
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca03g01732 K05863 - gmx:100797251 551.592