Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca03g01696 ATGGACAGGAGCAGTCCTCGTACTCAGCAGAACCTTTCTCGTCAGTCATCCAAGTCAAACATGGGAGTCAAGAAAGAGTCAGTTGCTAGCCCTCTCCCCAGTGGATGCTGTCGGGGCCTTAACAGCGTTAGGACTGTCTCATCCACCGCACCAACTTTGCAACACCAGCAGCGTTATGAAAGATTAGAAGTAAAGGTGGCAGGTTTAGAAAAAGAGGTTCAAAGACAGACAGAACTGAGAGTGATGTATAGGAAAAGAATGGAAAGGACCCAAGATTACTTAAAATACTGTCTCCAAGTAGCACAGGAGAATGGAATCTTGGACCTCATTGTCCATTCCAAAGGTGAACTTCCACAATCTCCCCTCTCTCTACATACCATCAACTCCAATACTTTCACTCCTTCGCACCACCACCCCAATCTAACCACCATCACTGAACAAGCCAAAATCAATGGATGGTATATTGACCCAAGTGAGATTGAGTTGGGAGAAAAAGTAGGGAAGGGAACGACGGCAGAAATTCATAGAGGGACATGGCGCGGATATGACGTGGCGGTGAAGTGCATGTCGGAGTCATTCTTCCACAAAAACGCAAACGGCGTCGTATTCTTTGCTCAGGAGCTTGAAACCCTGTCGAAACAGCGGCACCGGTTTGTGCTACAACTGATGGGCGCGTGCCTGGAGCCTCCGCGTCATGCATGGGTGGTTACCGAGTATCTGAAGTCCACGCTCAAGGAGTGGCTACATGGGCCGGGCAAAAGGCCCAGAGACAGAAGCGTGCCACTTCCTCCCTTCAAGGACAGACTCATGCGGGCCTTGGAAATAGCCCAAGCCAtgcagtatctccacgagcaaaaccccaaagtcatccatcgcgacttgaagcccagtaacatcttcttggacgatgccttgcatgttagggtcgccgattttggacATGCGCGCTTCTTGGGTGATGGCGAAATGGCTCTCACCGGAGAAACAGGAACATACGTGTATATGGCACCGGAGGTAATACGATGTGAGCCCTATAATGAAAAATGTGATGTATACAGTTTTGGAATCATACTCAACGAGCTACTTACTGGGAAATACCCTTATATTGAGACACAATTTGGTCCTGCCAAGATTGCTATGGAAGTTGTGGAGGGGAAGCTAAGGCCTGTGCTTCCATCAAAGGAGGATGGTGACGAAGTGGGAGAGCTGATTGACCTAATATGCCTTTGTTGGGATGCAAATCCATCCACTCGACCATCTTTCGTAACAATTAACCATAGTCTCAAATCATATGTCAAGAGGGTTCTTAAAAATTtagattag 1323 0.4376 MDRSSPRTQQNLSRQSSKSNMGVKKESVASPLPSGCCRGLNSVRTVSSTAPTLQHQQRYERLEVKVAGLEKEVQRQTELRVMYRKRMERTQDYLKYCLQVAQENGILDLIVHSKGELPQSPLSLHTINSNTFTPSHHHPNLTTITEQAKINGWYIDPSEIELGEKVGKGTTAEIHRGTWRGYDVAVKCMSESFFHKNANGVVFFAQELETLSKQRHRFVLQLMGACLEPPRHAWVVTEYLKSTLKEWLHGPGKRPRDRSVPLPPFKDRLMRALEIAQAMQYLHEQNPKVIHRDLKPSNIFLDDALHVRVADFGHARFLGDGEMALTGETGTYVYMAPEVIRCEPYNEKCDVYSFGIILNELLTGKYPYIETQFGPAKIAMEVVEGKLRPVLPSKEDGDEVGELIDLICLCWDANPSTRPSFVTINHSLKSYVKRVLKNLD 440
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca03g01696 440 Pfam Protein kinase domain 162 426 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cca03g01696 440 Gene3D Transferase(Phosphotransferase) domain 1 262 439 - -
Cca03g01696 440 PANTHER OS09G0443600 PROTEIN 24 435 - -
Cca03g01696 440 CDD STKc_MAP3K-like 166 428 - -
Cca03g01696 440 SMART serkin_6 160 432 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cca03g01696 440 Coils Coil 52 79 - -
Cca03g01696 440 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 24 435 - -
Cca03g01696 440 PIRSF TyrPK_CSF1-R 252 440 - -
Cca03g01696 440 PIRSF TyrPK_CSF1-R 14 102 - -
Cca03g01696 440 Gene3D Phosphorylase Kinase; domain 1 139 241 - -
Cca03g01696 440 ProSitePatterns Protein kinases ATP-binding region signature. 166 187 IPR017441 GO:0005524
Cca03g01696 440 MobiDBLite consensus disorder prediction 1 24 - -
Cca03g01696 440 SUPERFAMILY Protein kinase-like (PK-like) 133 425 IPR011009 -
Cca03g01696 440 ProSiteProfiles Protein kinase domain profile. 160 432 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cca03g01696 440 MobiDBLite consensus disorder prediction 1 34 - -
Cca03g01696 440 ProSitePatterns Serine/Threonine protein kinases active-site signature. 289 301 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca03g01696 Cca-Chr3 36062123 36065136 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca03g01696 153 435 MAP Kinase Kinase Kinase AT4G35780 36.620 1.19e-48 173
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-8 Cca03g01696 Pkinase 2.1e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca03g01696 - - gmx:100810435 760.755
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca03g01696 03 36062123 36065136 Cca03g01696 03 36062123 36065136 ECH