Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca03g01694 ATGTTGGTTACCAGATGGTTCATGCACATTGTTGTTTTCTTGATTGAGACCAACTTTTTGTTAAGGAAAAAGGTGCTGTATTTTGTCCATGGACTGAAGGAGTGTGTCCAGGTCTTCATTTGGCTTCGTTTGGTTCTTCTCATGTGGGTGCTGTTGATTAAACATGGGGTTGATCGATCTGAATTGGCCACAAAAATTTTGAATGGGGTAACATGGACTCTTGTATCCCTCCTCATTGGAGCATTCCTGTGGTTGATCAAGACATTGTTACTAAAGATTTTGGCGTCAAATTTCCAAGTTAAATCTTTCTTTGATCGAATCCAAGAATCCCTCTTCCATCAGTACATCCTGCAGACTCTCTCTGGGCCTCCACTTGTAGAAGAGGCTGAGAGGTCAGGGCATTGCCAAGTGTTAGTCATTTTAGTTTAA 429 0.4149 MLVTRWFMHIVVFLIETNFLLRKKVLYFVHGLKECVQVFIWLRLVLLMWVLLIKHGVDRSELATKILNGVTWTLVSLLIGAFLWLIKTLLLKILASNFQVKSFFDRIQESLFHQYILQTLSGPPLVEEAERSGHCQVLVILV 142
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca03g01694 142 PANTHER MECHANOSENSITIVE ION CHANNEL PROTEIN 9 1 134 - -
Cca03g01694 142 PANTHER MECHANOSENSITIVE ION CHANNEL PROTEIN 5 1 134 IPR016688 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca03g01694 Cca-Chr3 36059421 36059849 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca03g01694 1 134 Mechanosensitive Ion Channel Family AT5G12080 70.896 1.58e-61 199
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca03g01694 K22048 - gmx:100777617 226.483