Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca03g01689 ATGGCCAACACCTTTTATCCCCAACTCACGCTTGACTCTTCTTGCCCATCCACTTTCATCCCAAACTACAGTGCTCACCTTCAACACCACCCACGACAATATCAACATTTTTATCAATTCTCTCAACACCCAAATGAACTCCAAGCATCACAACAAGACCAACCACAATGTTTTGGATTAGTTAATTGTCCCCAAGAAGAATCCACAGCCACAATGTCTTTTTGGAAAGCATTTGACACGGTGGTGTCTGATGCAGAAGGGGTAAACGAAAAGTATGGAGAGCTTGAAGCTGTGTACAAGAAGAGAAAAGGTGATGATAATGAAAAAAAGAGTTGTGTTGAAAAGTCAGGTGATGGAGGGATGAAGAGGGGTAGGAAAAGGAGGAAAGTGGAGAAAGAAATGGGTGCATTTCTGGAGAGGTTGGTGAAGCGAGTGATGAAGCAGCAGGAGGGTCTTCAGAAGAGATTGATGGAAGTGATTGAGAGAATGGAGAAGGAGAGAGAGGAATGGGAAGAACGTTGGAGGGTTCGAGAAACGGAAATTCAGGAGAGAGAAGCGATTGCGAAAGCACGTGAGCGAGATCTGGCTTCTTGGAGAGACTCTTCCATTGTGTCCACCATAGAGAAAATAAGTGGTCAAAGCTTCCTTCTCTTTTCCGCCAACTTATCTACCAACCATACATGA 684 0.443 MANTFYPQLTLDSSCPSTFIPNYSAHLQHHPRQYQHFYQFSQHPNELQASQQDQPQCFGLVNCPQEESTATMSFWKAFDTVVSDAEGVNEKYGELEAVYKKRKGDDNEKKSCVEKSGDGGMKRGRKRRKVEKEMGAFLERLVKRVMKQQEGLQKRLMEVIERMEKEREEWEERWRVRETEIQEREAIAKARERDLASWRDSSIVSTIEKISGQSFLLFSANLSTNHT 227
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca03g01689 227 Coils Coil 146 180 - -
Cca03g01689 227 MobiDBLite consensus disorder prediction 106 121 - -
Cca03g01689 227 MobiDBLite consensus disorder prediction 106 129 - -
Cca03g01689 227 PANTHER - 107 220 - -
Cca03g01689 227 PANTHER TRIHELIX TRANSCRIPTION FACTOR GTL2 107 220 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca03g01689 121 211 Trihelix Transcription Factor Family AT1G76890 40.659 8.53e-11 59.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca03g01689 - - ccaj:109816097 260.766