Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca03g01687 ATGGAGGATTTCATCTTCAAAACTATGACATCCTCTTTTGCCTTCCTGGTTCTCTATATTATGATTAAATTTGTGAATAACATTTGGTGGAGACCCAAAAGTACTGAGAAATTATTAAGGCAGCAAGGGATCAGAGGCTCTTCCTACAAGCTATTTGATGGGGACATCTCAGTCATGAAGAACTATGATTTGAAGGCATCGTCAAAGGCCATCTCCCTCAACCACCAAATCATCACTCGAGTCATCCCTTTCGTTCACAAAATGGTTCAGCAACATGGAAATGTTTCATTGTATTGGTTTGGAAGAAGAGCAAGACTGATAGTAGCAGACGCAGAGCTTGCACGATTAGTTTTAACAAATAAGAATGGCCACTTTGTCAAGCCACCACGTACCCCCTTCGTCAAACTTCTAACATTAGGATTGACAACATTAGAAGGCGAAACATGGACTAAACGCAGAAAGGTGGTAACATCAGCTTTCCAGCTTGAGAAGTTGAAGGCAATGGTGCCAGCATTTTCAACCAGTTGTCACAACATGATGGAGCGGTGGGGAAAGCTAGTAGAACCAAGTGGATCATTTGAATTAGATGTTAGTGCAGAATTCGACATTCTTGCCGGTGATGTCATAGCTCGAACAGCCTTTGGAAGTAGCTACCAAGAGGGAAAGCAAATTTTCGAACTACAAAAGGAGCAAGTAATGTTGGTGAACGAAGCCATGAACAACATCTATATCCCAGGTTTCAGATTCTTACCAACTAGGAAGAACAAGCGTAGGTACAACGTAGATGTCCAAATCAAAGCTATGTTGAGGGATATTATTCAAAAGAAAGAGCAAGTAATGAAGGAGGGTAAATTGAAAGAGCACGACTTATTAAGCATACTACTACAATGTAGAGATCAAAATAATTCTCTAACAACAGAGGACGTGATTGAGGAATGCAAGTTGTTTTACTTTGCTGGCCAAGCGACCACAGCCAACACGCTTGCATGGACTATGATTGTTTTATCTATGCATCCTGATTGGCAAGAAAAGGCAAGAGAGGAAGTGTTGGAGATTTTTGACAAAAGTGAACCCGATTTTGAAGGCATAAATCACCTCAAGATAGTGTCAATGATATTGTATGAAGTTTTGAGATTATATCCTCCTATAACAGCCTTTCACAAATACAATTGGTGTGAGACAAGGGTAGGTAACATGTCCATCCCAGCTGGGGTTGAGGTTTGCATACCCTTGCTACTTCTTCATTATGATGGCAACTATTGGGAGAAGCCTGAAGAGTTCAACCCAGTTAGGTTTACTGAAGGGGTTTCGAAAGCTTCAAAGGATCAAATTGCTTTCTATCCGTTTGGTTGGGGACCAAGAATCTGTCCTGGCCAAAACTTTGCATTCATAGAAGCAAAGATGGCTCTGGCTATGATTCTTCAACGTTTCTCTTTCCAGCTCTCACCCTCTTATGCTCATGCTCCAAGTAATTGTATTACTCTTAAGCCACAATTTGGAGCTCCCATTGTTATTCGTCGGACTTAG 1527 0.4113 MEDFIFKTMTSSFAFLVLYIMIKFVNNIWWRPKSTEKLLRQQGIRGSSYKLFDGDISVMKNYDLKASSKAISLNHQIITRVIPFVHKMVQQHGNVSLYWFGRRARLIVADAELARLVLTNKNGHFVKPPRTPFVKLLTLGLTTLEGETWTKRRKVVTSAFQLEKLKAMVPAFSTSCHNMMERWGKLVEPSGSFELDVSAEFDILAGDVIARTAFGSSYQEGKQIFELQKEQVMLVNEAMNNIYIPGFRFLPTRKNKRRYNVDVQIKAMLRDIIQKKEQVMKEGKLKEHDLLSILLQCRDQNNSLTTEDVIEECKLFYFAGQATTANTLAWTMIVLSMHPDWQEKAREEVLEIFDKSEPDFEGINHLKIVSMILYEVLRLYPPITAFHKYNWCETRVGNMSIPAGVEVCIPLLLLHYDGNYWEKPEEFNPVRFTEGVSKASKDQIAFYPFGWGPRICPGQNFAFIEAKMALAMILQRFSFQLSPSYAHAPSNCITLKPQFGAPIVIRRT 508
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca03g01687 508 Pfam Cytochrome P450 84 487 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca03g01687 508 Gene3D Cytochrome P450 65 507 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca03g01687 508 PANTHER CYTOCHROME P450 FAMILY MEMBER 1 506 - -
Cca03g01687 508 SUPERFAMILY Cytochrome P450 75 506 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca03g01687 508 PRINTS P450 superfamily signature 319 336 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca03g01687 508 PRINTS P450 superfamily signature 371 382 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca03g01687 508 PRINTS P450 superfamily signature 447 456 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca03g01687 508 PRINTS P450 superfamily signature 456 467 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca03g01687 508 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 449 458 IPR017972 GO:0005506|GO:0016705
Cca03g01687 508 PRINTS E-class P450 group I signature 89 108 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca03g01687 508 PRINTS E-class P450 group I signature 204 222 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca03g01687 508 PRINTS E-class P450 group I signature 308 325 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca03g01687 508 PRINTS E-class P450 group I signature 328 354 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca03g01687 508 PRINTS E-class P450 group I signature 410 434 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca03g01687 508 PRINTS E-class P450 group I signature 446 456 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca03g01687 508 PRINTS E-class P450 group I signature 456 479 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca03g01687 508 PANTHER CYTOCHROME P450 72A15-LIKE 1 506 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca03g01687 Cca-Chr3 36003681 36007018 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca03g01687 23 504 Cytochrome P450 AT3G14620 48.354 2.46e-164 474
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca03g01687 - - aip:107623710 691.034
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca03g01687 03 36003681 36007018 Cca03g01687 03 36003681 36007018 ECH