Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca03g01685 ATGGGGAACAAAATCGCGCGCACGACGCAGGTTTCGGCTTCGGAGTATTACCTGCACGATCTGCCGTCGACGTACAATCTGGTTCTGAAGGAGGTGCTAGGTCGCGGTCGCTTCTTGAAGTCGATTCAGTGCAAACACGACGAGGGTTTGGTCCTCGTCAAGGTCTATTTCAAGCGTGGCGATTTCCTCGATCTCTCTCACTACGAACGCAGTCTCTCTCAGATCAAAGGAATCTTCAGCTCCATCCCTCACCCTCACGTTTGGCCCTTTCAGTTTTGGCTAGAAACAGATAAAGCAGCGTATCTTTTGAGGCAGCATTTCTTTCATAATCTGCATGATAGGTTAAGCACTCGTCCTTTTCTCAGTTTTGTTGAGAAGAAATGGTTGGCTTTTCAGTTGCTTGAAGCTGTAAAACAGAGCCACCAGAAAGGAGTGTGTCACGGTGATATCAAGTGTGAGAATGTGCTGATTACGTCTTCCAATTGGCTTTACCTTGCTGATTTTGCATCTTTCAAACCCACTTACATTCCATATGATGACCCCTCTGATTTCTCCTATTTCTTTGACACTGTTGGCCGAAGACTCTGTTATCTTGCACCTGAGAGATTTTATGAGCATGGAGAGGAGCTGCAGGTGGCACAAGAAACTCCCTTAAAATCCTATATGGATATATTTGCTGTCGGGCTGCAATAG 693 0.4618 MGNKIARTTQVSASEYYLHDLPSTYNLVLKEVLGRGRFLKSIQCKHDEGLVLVKVYFKRGDFLDLSHYERSLSQIKGIFSSIPHPHVWPFQFWLETDKAAYLLRQHFFHNLHDRLSTRPFLSFVEKKWLAFQLLEAVKQSHQKGVCHGDIKCENVLITSSNWLYLADFASFKPTYIPYDDPSDFSYFFDTVGRRLCYLAPERFYEHGEELQVAQETPLKSYMDIFAVGLQ 230
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca03g01685 230 Pfam Protein kinase domain 29 229 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cca03g01685 230 SUPERFAMILY Protein kinase-like (PK-like) 24 228 IPR011009 -
Cca03g01685 230 ProSitePatterns Serine/Threonine protein kinases active-site signature. 145 157 IPR008271 GO:0004672|GO:0006468
Cca03g01685 230 ProSiteProfiles Protein kinase domain profile. 27 230 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cca03g01685 230 PANTHER PHOSPHOINOSITIDE 3-KINASE REGULATORY SUBUNIT 4 1 228 IPR045162 GO:0004674|GO:0016236|GO:0045324
Cca03g01685 230 SMART serkin_6 27 226 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cca03g01685 230 Gene3D Transferase(Phosphotransferase) domain 1 22 229 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca03g01685 Cca-Chr3 35988353 35990303 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca03g01685 23 228 AGC Kinase Gene Family AT5G04510 22.535 3.80e-09 53.9
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_Pl-Tthe Cca03g01685 Pkinase 6.5e-16 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca03g01685 K08333 - gmx:100796837 425.631