Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca03g01684 ATGGTGAGGTGTGTCATTGCTGAACTTTTCCTTGAGGGGCAGCCACTATTTGAACTGTCTCAACTTCTTGCTTATCGCAGAGGACAATATGATCCATGTCAACATCTTGAAAAAATACCTGATCTTGGAATCCGTAAGATGATATTGCACATGGTTCAGTTAGAACCAGAGTCTCGATTTTCTGCTGAAAGATATCTGAAGGAATATGCTGAAGTTGTAATTCCAACCTATTTTTCACCATTTCTGCATAACTTTTACCAATGTTGGAGTCCTCTTCATTCTGATATGAGGATTTTACTATGCCAAAGTGTTTTCCCAGAGATACTTAAACAAATGATGAACAAGAAGTCATCTGATGAGGCAGGTGTTAATTCTGGGGAATTTTTGGAAGAAGTGGTTGCTAAAGAAAGTGTGAGTTTCATGGGGGATTCATTGATGAGGAGACAGAACATAGACAAAGGCTTAGTCCATGATCACTATGAACTTCTTGGTGATATAAATAGCCTACTGAGGGATGCTAAAAAAGTTAATAATCCATCGCATGTAACAGGAAATGCACATAATTCTACCTTTACTGAAAATCTTAAAAAGTTGCAAACTGGTAAACTGCTTCAAACTATCTCCAGTGCATTTCGAGGAAATGACCATCCCTTTCTGAAAAGTATTAATATGAATGATTTAAATTCATTGATGTCTCAGTATGATAGTCAATCAGATACATTTGGAATGCCCTTTTTACCCTTACCGAAGGATAGAATGAGATGTGAAGGCATGGTTTTGATAACTTCTTTGCTCTGCTCCTGCATACGCAATGTCAAGTTGCCTCACCTGAGGAGGGCAGCTGTACTCTTGTTGAAGGCTTCTGCCCTATATATTGATGATGAAGATCGTTTGCAGCGTGTTATCCCATACGTGATTGCAATGCTTTCAGATCCAGCAGCAATTGTGCGTTGTGCTGCTTTAGAGACTTTGTGTGACATTCTTCCCTTGGTGCGAGATTTTCCTCCCAGTGATGCAAAGATATTTCCTGAGTATATTCTTCCAATGCTTTCAATGCTTCCTGATGATCCAGAGGAAAGTGTCAGGATATGTTATGCCAGCAATATAGCTAAGCTGGCTCTGACTGCTCATGGATTCTTGATACGTTCAATAAGCCTAAGTGAGGCAGGTGTCCTAGATGAATTGAATTCACAACAGAAGCCATTGACATCATCTACTCGGACCTCTAGAAGAATGAAGAGGATAAATGGTGATGCCCAACTTCTGCAGCTGAGGAAATCCATTGCGGAGGTTGTCCAAGAACTTGTTATGGGTCCAAAGCAAACCCCAAATATAAGGAGAGCACTTCTACAAGATATTGGTAAACTGTGCTGCTTCTTTGGTGTGAGACAGAGTAATGACTCTCTCTTACCTATCCTTCCTGCTTTCTTAAATGATCAGGATGAGCAATTAAGGACCGTATTCTATGAAAAGATAGTTTATGTCTGCTTTTTTGTGGGCCAAAGAAGTGTAGAAGAATATTTATTACCTTACATTGAACAAGCTTTAAGTGACATGATAGAAGCTGTCACTGTCAAAGCTTTAGAATGTTTGACTATTCTTTGCAAAAGTGGGTTCTTCCGGAAGAGGATATTACTTCAAATGATAGACCGTGCCTTTCCTTTGTTGTGTTATCCTAGTGAATGGGTACGGAGATCAGTTGTCTCTTTTATTGCAGCTAGCAGTGAGAGCTTGGGTGCAGTAGATTCTTATGTCTTCCTTGCTCCTGTTATACAGCCTTTCCTCCACAGGCAACCTGTGTCTCTTGCTTCAGAGAAGGCTCTTATGTCTTGTTTAAAACCTCCTGTCTCAGGACAGGTTTTCTATGAAGTCTTGGAGAATTCCATGAGTTCGGACATGTTAGAAAGGCAAAGAAAAATATGGTATAATTCTTCACAATCTAGACTATGGGAAAAGGATTTACTGAAAAAAGGAACTGATGAGTTGGACTCATTGAAGAACTGGACTGACAAGCAACAAGGTCTTGGGGTTCAACAAACTGTTGGCACCTTCCAACTGCCAGGACTAACTGACTGTGACAAAGCTGAGGCAAAATTGAGAGATATGGGGGCATTTATGCATAATGATAGCAGTACTACAGTACATCGTGATACCCAATGCCCGGAGAAGTTACAGTTTTCAGGATTTATGTCACCACATTTTAGTGGTCTGAACAGTTTGACATATGAAAAGCCAGCAGAAGGCATACCTTTGTACTCCTTCAATGTGGACAGGCAAGGAATGGGAATCCCTCCTGCAGCATCCGATCCTCCACTCCAAATGAATTCTTTAGGTGTTAGTTCATCTGCAATGCCTTTGGTTAATCCACTTAGTGAGTCCTTTAATTTGGCTAGTTCAGTTCCAGCACCAAAGCTTCTTTCAGGTTCTTTTAGCATCAGCAATGGTTCTAAACAGTTCCATCAAGTGGTTCATGAACCAGATGCCCTGGAAAATGAGTCAACCATTTTTAATAGCACATTTCAAGATGTGGGATTATCTTCTAATATTAAAGGTACTTCAATCGCACCAGAAGATGCAAATGCCCAAACTGATCTATCAGGATTTTCATCTTCTGATCGAGCAACCATTCCTGATTCTGGTTGGAGGCCTCGTGGGGTGTTGGTTGCACACCTCCTTGAGCACCGTTCAGCTGTCAATGACATAGCTACTTCTGCTGATCATAGCTTCTTTGTGAGTGCATCTGATGATTCTACCGTCAAGATTTGGGATTCCAGAAAGCTGGAAAAGGACATTTCATTCAGGTCAAAGCTAACTTATCACCTGGAGGGAAGCCGTGTGCTGTGTGCAACAATGCTTCCAGGTTCTACACAAGTTATAATTGGAGCATCTGATGGATTTATTCATATGTTTTCTGTTGATCATATCTCTAGAGGTCTAGGAAACGTTGTTGAGAAATATTCTGGTATTGCTAATATCACAAAGAAGGATATCAAGGAAGGTGCCATACTCAGCCTTTTGAATTGCCCTGTGGATAATTATACCATTATGTATGGCACCCAGAACTGTGGCATTCATCTGTTGGACACTAGGTCAAATTCCAATACCTGGACTCTAAAAGCTACTCCTGAGGAGGGCTATGCTTCTTGTCTGGCATCAGGGCCTTGTAGTAATTGGTTTGTATCAGGGTCATCCCGGGGGGTTATTACACTTTGGGATCTGAGGTTTCTTGTACCTGTGAATTCTTGGCAGTATTCTCTTGCTTGCCCTATAGAAAAGATGTGTCTCTTTCTTTCTCCTTCAAATGCTTCTCTGTCTTCAGCCGATAGGCCCCTTGTTTATGTGGCTGCTGGTTGCAATGAAGTTTCTCTTTGGAATGCAGAGAATGCTATCTGCCACCAGGTCCTAAGGATGGCCAATTATAACAGTGATGCCGAAATGTCTGATCTGCCTTGGGCCTTGGCCAGACCTTTAAGTAAGCCACATTCTCAATCAGATGTAAGACAAAATGTTAATCGCAAATATAGAGTTGATGAGCTAAATGAACCTCCTCCTCGTCTTCGTGGTATTCGTTCATTACTTCCCTTGCCTGGGGGTGATTTATTGACTGGAGGCACTGATTTAAAGATACGTCGGTGGGATCATTACAGTCCTGACAAAAGTTACTGTATTTGTGGACCAAACTTAAAAGGTGTAGGAAATGATGATTTTTATGAAACAAAATCTAGTTTTGGGGTGCAAGTTGTACAGGAAACAAAAAGACGTCCTCTTACAATCAAGCTGACAGCAAAGGCAATTCTAGCAGCTGCTGCCACTGATTCTGCTGGTTGCCACCGTGACTCTATTGTTTCTTTGGCTTCTATCAAGTTAAACCAGAGACTCTTACTTTCAAGTGGTAGAGATGGGGCCATCAAGTTCTTCTTCTTCTTCTGCAAAATCCCAATAGAATACATTGTCATACCAAGGGAATTAGACCAAGCTCTGCAGGCAGCTAAAAATAATCTTGTGGCTTCTTACGCTTTGCACGTTGATAAGAATCCTGATGGTGGGGATTTTACCTCAATTCAAGAAGCCATTGATTCCCTTCCATTCAGCAATCTCGTGAGAGTGGTCATAAAAGTCCATGCAGGGGTCTACACGGAGAAAGTTAACATCCCTGCTTCGAAATCCTTCATAACAATAGAAGGAGCTGGTGCAGATGAAACCATTGTTAAATGGGGTGACACTGCTAAAACTCTTGGTCCAAATGGGAAACCAATGGGAACCCATGATTCAGCAACTTTTACAGTGAATTCACCTTATTTCATTGCCAAGAACATCACGTTCCAAAACACAACTCCTGTTCCTGCACCAGGAGAAGTTGGGGTGCAAGCTGTGGCATTAAGGATTTCAGCAGACACAGCAGCATTTGTAGGCTGCAAATTCTTAGGAGCACAAGATACACTTTATGATCATTTAGGCAGACATTACTACAAGGATTGTTACATTGAAGGCTCTGTTGATTTCATATTTGGCAACTCTCTCTCGCTGTTTGAGGGATGTCACGTGCATGCCATAGCACAGAAGATAGGGGCAGTTACAGCTCAAGGAAGGAGTGGTATGTGGCAAGACACGGGGTTCTCATTTGTGAACTGTAAGGTCACGGGATCTGGGGCACTGTACCTTGGAAGGGCTTGGAGACCCTTTTCTCGCGTGGTCTTTGCTTACACATATATGGACAACATTATTATTCCCAAAGGCTGGTATAACTGGGGTGATCCTAACCGTGAAATAACTGTATTCTACGGACAGTACAAATGCACAGGACCTGGAGCAAACTTTGCAGGGAGAGTATCATGGTCAAGAGAACTCACAGACGAGGAAGCTGCACCTTTTCTTTCACTTAGCTTTATTGATGGGACTGAATGGATCGGTTTGTAG 4917 0.4179 MVRCVIAELFLEGQPLFELSQLLAYRRGQYDPCQHLEKIPDLGIRKMILHMVQLEPESRFSAERYLKEYAEVVIPTYFSPFLHNFYQCWSPLHSDMRILLCQSVFPEILKQMMNKKSSDEAGVNSGEFLEEVVAKESVSFMGDSLMRRQNIDKGLVHDHYELLGDINSLLRDAKKVNNPSHVTGNAHNSTFTENLKKLQTGKLLQTISSAFRGNDHPFLKSINMNDLNSLMSQYDSQSDTFGMPFLPLPKDRMRCEGMVLITSLLCSCIRNVKLPHLRRAAVLLLKASALYIDDEDRLQRVIPYVIAMLSDPAAIVRCAALETLCDILPLVRDFPPSDAKIFPEYILPMLSMLPDDPEESVRICYASNIAKLALTAHGFLIRSISLSEAGVLDELNSQQKPLTSSTRTSRRMKRINGDAQLLQLRKSIAEVVQELVMGPKQTPNIRRALLQDIGKLCCFFGVRQSNDSLLPILPAFLNDQDEQLRTVFYEKIVYVCFFVGQRSVEEYLLPYIEQALSDMIEAVTVKALECLTILCKSGFFRKRILLQMIDRAFPLLCYPSEWVRRSVVSFIAASSESLGAVDSYVFLAPVIQPFLHRQPVSLASEKALMSCLKPPVSGQVFYEVLENSMSSDMLERQRKIWYNSSQSRLWEKDLLKKGTDELDSLKNWTDKQQGLGVQQTVGTFQLPGLTDCDKAEAKLRDMGAFMHNDSSTTVHRDTQCPEKLQFSGFMSPHFSGLNSLTYEKPAEGIPLYSFNVDRQGMGIPPAASDPPLQMNSLGVSSSAMPLVNPLSESFNLASSVPAPKLLSGSFSISNGSKQFHQVVHEPDALENESTIFNSTFQDVGLSSNIKGTSIAPEDANAQTDLSGFSSSDRATIPDSGWRPRGVLVAHLLEHRSAVNDIATSADHSFFVSASDDSTVKIWDSRKLEKDISFRSKLTYHLEGSRVLCATMLPGSTQVIIGASDGFIHMFSVDHISRGLGNVVEKYSGIANITKKDIKEGAILSLLNCPVDNYTIMYGTQNCGIHLLDTRSNSNTWTLKATPEEGYASCLASGPCSNWFVSGSSRGVITLWDLRFLVPVNSWQYSLACPIEKMCLFLSPSNASLSSADRPLVYVAAGCNEVSLWNAENAICHQVLRMANYNSDAEMSDLPWALARPLSKPHSQSDVRQNVNRKYRVDELNEPPPRLRGIRSLLPLPGGDLLTGGTDLKIRRWDHYSPDKSYCICGPNLKGVGNDDFYETKSSFGVQVVQETKRRPLTIKLTAKAILAAAATDSAGCHRDSIVSLASIKLNQRLLLSSGRDGAIKFFFFFCKIPIEYIVIPRELDQALQAAKNNLVASYALHVDKNPDGGDFTSIQEAIDSLPFSNLVRVVIKVHAGVYTEKVNIPASKSFITIEGAGADETIVKWGDTAKTLGPNGKPMGTHDSATFTVNSPYFIAKNITFQNTTPVPAPGEVGVQAVALRISADTAAFVGCKFLGAQDTLYDHLGRHYYKDCYIEGSVDFIFGNSLSLFEGCHVHAIAQKIGAVTAQGRSGMWQDTGFSFVNCKVTGSGALYLGRAWRPFSRVVFAYTYMDNIIIPKGWYNWGDPNREITVFYGQYKCTGPGANFAGRVSWSRELTDEEAAPFLSLSFIDGTEWIGL 1638
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca03g01684 1638 PANTHER PHOSPHOINOSITIDE 3-KINASE REGULATORY SUBUNIT 4 4 1306 IPR045162 GO:0004674|GO:0016236|GO:0045324
Cca03g01684 1638 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 891 923 - -
Cca03g01684 1638 Pfam Pectinesterase 1348 1632 IPR000070 GO:0030599|GO:0042545
Cca03g01684 1638 ProSiteProfiles HEAT repeat profile. 469 507 IPR021133 -
Cca03g01684 1638 Pfam HEAT repeat 301 329 IPR000357 GO:0005515
Cca03g01684 1638 SUPERFAMILY Pectin lyase-like 1335 1637 IPR011050 -
Cca03g01684 1638 Pfam WD domain, G-beta repeat 887 923 IPR001680 GO:0005515
Cca03g01684 1638 ProSitePatterns Pectinesterase signature 2. 1495 1504 IPR033131 -
Cca03g01684 1638 ProSiteProfiles Trp-Asp (WD) repeats profile. 891 923 IPR001680 GO:0005515
Cca03g01684 1638 Gene3D - 996 1306 IPR015943 GO:0005515
Cca03g01684 1638 SMART WD40_4 1267 1307 IPR001680 GO:0005515
Cca03g01684 1638 SMART WD40_4 932 971 IPR001680 GO:0005515
Cca03g01684 1638 SMART WD40_4 1179 1213 IPR001680 GO:0005515
Cca03g01684 1638 SMART WD40_4 884 923 IPR001680 GO:0005515
Cca03g01684 1638 SMART WD40_4 1031 1072 IPR001680 GO:0005515
Cca03g01684 1638 SUPERFAMILY ARM repeat 255 597 IPR016024 -
Cca03g01684 1638 Gene3D - 250 398 IPR011989 -
Cca03g01684 1638 Gene3D - 440 610 IPR011989 -
Cca03g01684 1638 MobiDBLite consensus disorder prediction 854 873 - -
Cca03g01684 1638 Gene3D - 1336 1638 IPR012334 -
Cca03g01684 1638 ProSiteProfiles HEAT repeat profile. 301 333 IPR021133 -
Cca03g01684 1638 SUPERFAMILY WD40 repeat-like 888 1307 IPR036322 GO:0005515
Cca03g01684 1638 Gene3D - 813 992 IPR015943 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca03g01684 Cca-Chr3 35978384 35988268 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca03g01684 1351 1636 Carbohydrate Esterase AT5G47500 50.523 2.37e-95 311
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca03g01684 K08333 - gmx:100818467 2299.63