Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca03g01649 ATGAGGACCATTCCCACCGCAGCAATACCACCCACATCCGCCACGTCATCACCAAGCCCTGCGCGCTCCACGTGGCACTCTCCTGTTCCCTACCTGTTCGGAGGACTCGCCGCCATGCTCGGCCTCATAGCCTTTGCGCTCTTGATCTTGGCCTGCTCCTACTGGAAACTCTCGGGTCACTTGCAGAACGAAGAAAGTAGTGATAGGGACTTAGAGAATGGTGGCGGTGAGAAACAGAGTGACTCTGCCCACACTGAATCCGTTAAGCCTTACGAAGAGAAGATTCTCGTCATTATGGCCGGTGATGACAAACCCACATTCCTGGCCACCCCTAAGTCCTCCTTTTCTACTCATGGAATCCCCCATCATTCTGACACAAACCTCGAAAACCGCCTCACTTGGGAGAAATCTGACAAGGAAACGGAGAACCATCTTCAACAATAG 444 0.527 MRTIPTAAIPPTSATSSPSPARSTWHSPVPYLFGGLAAMLGLIAFALLILACSYWKLSGHLQNEESSDRDLENGGGEKQSDSAHTESVKPYEEKILVIMAGDDKPTFLATPKSSFSTHGIPHHSDTNLENRLTWEKSDKETENHLQQ 147
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca03g01649 147 MobiDBLite consensus disorder prediction 109 123 - -
Cca03g01649 147 PANTHER PROTEIN GLUTAMINE DUMPER 4-RELATED 14 140 IPR040359 GO:0080143
Cca03g01649 147 MobiDBLite consensus disorder prediction 109 147 - -
Cca03g01649 147 MobiDBLite consensus disorder prediction 63 89 - -
Cca03g01649 147 MobiDBLite consensus disorder prediction 1 23 - -
Cca03g01649 147 MobiDBLite consensus disorder prediction 124 147 - -
Cca03g01649 147 PANTHER PROTEIN GLUTAMINE DUMPER 2 14 140 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca03g01649 Cca-Chr3 35532529 35533273 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca03g01649 23 117 Glutamine Dumper (GDU) Family AT5G57685 64.646 3.94e-34 115
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca03g01649 - - gmx:100500572 176.792
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca03g01649 03 35532529 35533273 Cca03g01649 03 35532529 35533273 ECH