Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca03g01644 ATGAAGATAGCGGTGGAAGGGTGCATGCACGGCGACCTGGAGAATGTGTACAGAACCCTTCAGCAGCTGGAGAAATCCAACAACACCAAAATCGACCTCCTCATATGTTGCGGCGATTTCCAAGCCGTGAGGAACGAGAACGACTTGAAGAGCTTGAACGTCCCACCGCGCTACCGCGCCATGAATACTTTCTGGAAGTACTACTCCGGCGCTGAGGTTGCCCCGTACCCCACCATCTTCATCGGCGGCAACCACGAAGCATCCAATTACCTCCGGGAACTGTACTATGGAGGATGGGCTGCTCCTAATATCTACTTCTTGGGAGCTGCTGGAGTGGTGAGGTTTGGGAATGTCCGAATTGGTGGCCTCTCTGGGATTTACAATTCTCGTCACTATAAATTAGCAGGACATTTTGAGAGGCCTCCTTATGATCAGAATACCATTAGGTCTGTTTATCATGTTCGCGAATATGATGTTCGCAAACTAATGCAAGTCAGGGAGCCTGTTGATGTTTTTCTTTCGCATGATTGGCCGCTGTGTATCACTGATTATGGGGATTGGAGGGAGCTTGTTAGGCGCAAGCATTTTTTCAGGCAAGAGATAGAGGAAAAAAGACTTGGGAGTAAACCTGCTGCTGAACTTCTGGAAAAACTGAAACCACATTATTGGTTTTCAGCTCACCTACACTGCAAGTTTGCTGCTGTTGTTCAACATGGGGAAGGAGGTCCACTGACAAAATTCCTTGCGCTGGATAAATGTATTCCTGGGCGTGATTTCTTACAGATTGTGGAAATTGAATCGGATGCAGGGCCTTATGAGATTCAGTATGATGAAGAATGGTTAGCAATAACACGGAAGTTCAACCCTATCCTCCCTTTGACAACCAAAGGTGCAGACTTCAGAGGTGTAAATCTTGAGATGGACGATTCTCTTGAATGGGTTAGAAGCAGGCTACAAGAGAGGGGGTGCAAACCTTTCGAATTTGTTAAAACAGCTCCATGTTATGATCCTTCACGGTCCAATTTTGATGGTGCTTTTGCTGTGAATCCCCGAAATCCTCAGACAGAATCTCTTTTGCAGCTTCTGGAACTTCCATATCTTCTCGATAGCAATCCTGAAGCAAAGGACTTGTCACCTTATCCTTCTTCAATTCAAAGAGGCATTGGTTTTAATAGCGAGGACATTCCCATtgatgatTGCAAGTCTTCATGCCCATCAGCAGAGTTAATCATAAGAGACATAGTCATCTCATCCTCTTCTACTGATCCTTCCATTCCTGGAAAGCTCCTTCGCTTGGTTTTCCATGATTGCTTTGTGGAGGGATGTGATGCCTCTCTGATGCTACAAGGGAACAATACAGAGCAAACTGATCCAGGAAATAGGTCTGTTGGAGGGTTTTCAGTTATAGATTCGGCAAAAAGAGTCCTGGAGAAATTCTGCCCTGGAACTGTTTCTTGTGCAGATATAATAGCTTTAGCTGCTAGAGACGCTGTTGAAATAGCTAGAGGACCAAGGACTATGATTCCTACAGGTAGGAGAGATGGGATGGTTTCAGTTGCTTCAAATGTCAGACCCAACATTGTGGACACCAGTTTTTCAATAGATGAGATGGTTAAACTCTTTGCTGCTAAAGGATTATCCTTACTTGATCTTGTCGTCCTTTCAGGAGCGCATACCATAGGCACAGCTCATTGCAGCTCATTCAGGGGTCGTTTTCAAGAAGATTCATCGGGAAAGCTTAGGCTCATTGACAAAACCCTTGATAGTGACTACGCTAATGAGCTAATGAAACAGTGTCCAGTTGGTGTTCAACCATCTGTAACGGTGAACAATGACCCTGAAACATCTATGGCCTTTGACAACAAGTACTACCAAAATCTTCTGTCCCACAAGGGGCTATTCCAGTCAGATTCTGTTTTGTTAAGCAATGATAACACAAGGAAATTGGTGGAGAATTTTGCCAATGATCAAGAACTTTTCTTTGAAAATTGGGGTCAGTCATTCTTGAAGCTCACTAGTGTTGGAGTAAAATCCGGTGATCAAGGTGAAATTCGACAATCTTGTGAATCAACTAATGCTTGA 2082 0.4428 MKIAVEGCMHGDLENVYRTLQQLEKSNNTKIDLLICCGDFQAVRNENDLKSLNVPPRYRAMNTFWKYYSGAEVAPYPTIFIGGNHEASNYLRELYYGGWAAPNIYFLGAAGVVRFGNVRIGGLSGIYNSRHYKLAGHFERPPYDQNTIRSVYHVREYDVRKLMQVREPVDVFLSHDWPLCITDYGDWRELVRRKHFFRQEIEEKRLGSKPAAELLEKLKPHYWFSAHLHCKFAAVVQHGEGGPLTKFLALDKCIPGRDFLQIVEIESDAGPYEIQYDEEWLAITRKFNPILPLTTKGADFRGVNLEMDDSLEWVRSRLQERGCKPFEFVKTAPCYDPSRSNFDGAFAVNPRNPQTESLLQLLELPYLLDSNPEAKDLSPYPSSIQRGIGFNSEDIPIDDCKSSCPSAELIIRDIVISSSSTDPSIPGKLLRLVFHDCFVEGCDASLMLQGNNTEQTDPGNRSVGGFSVIDSAKRVLEKFCPGTVSCADIIALAARDAVEIARGPRTMIPTGRRDGMVSVASNVRPNIVDTSFSIDEMVKLFAAKGLSLLDLVVLSGAHTIGTAHCSSFRGRFQEDSSGKLRLIDKTLDSDYANELMKQCPVGVQPSVTVNNDPETSMAFDNKYYQNLLSHKGLFQSDSVLLSNDNTRKLVENFANDQELFFENWGQSFLKLTSVGVKSGDQGEIRQSCESTNA 693
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca03g01644 693 SUPERFAMILY Heme-dependent peroxidases 397 692 IPR010255 GO:0004601|GO:0006979|GO:0020037
Cca03g01644 693 PRINTS Plant peroxidase signature 610 625 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cca03g01644 693 PRINTS Plant peroxidase signature 626 643 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cca03g01644 693 PRINTS Plant peroxidase signature 666 679 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cca03g01644 693 PRINTS Plant peroxidase signature 502 517 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cca03g01644 693 PRINTS Plant peroxidase signature 464 477 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cca03g01644 693 PRINTS Plant peroxidase signature 549 561 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cca03g01644 693 PRINTS Plant peroxidase signature 428 448 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cca03g01644 693 PRINTS Plant peroxidase signature 404 423 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cca03g01644 693 PRINTS Plant peroxidase signature 483 493 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cca03g01644 693 Gene3D Peroxidase, domain 2 528 674 - -
Cca03g01644 693 Gene3D - 7 246 IPR029052 -
Cca03g01644 693 CDD secretory_peroxidase 401 688 IPR033905 GO:0004601|GO:0042744
Cca03g01644 693 Pfam Calcineurin-like phosphoesterase 1 230 IPR004843 GO:0016787
Cca03g01644 693 Pfam Lariat debranching enzyme, C-terminal domain 245 365 IPR007708 GO:0006397|GO:0016788
Cca03g01644 693 SUPERFAMILY Metallo-dependent phosphatases 1 253 IPR029052 -
Cca03g01644 693 ProSiteProfiles Plant heme peroxidase family profile. 385 692 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cca03g01644 693 CDD MPP_Dbr1_N 3 260 IPR041816 -
Cca03g01644 693 Gene3D - 401 692 - -
Cca03g01644 693 SMART DBR1_2 236 368 IPR007708 GO:0006397|GO:0016788
Cca03g01644 693 PRINTS Haem peroxidase superfamily signature 426 440 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cca03g01644 693 PRINTS Haem peroxidase superfamily signature 550 565 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cca03g01644 693 PRINTS Haem peroxidase superfamily signature 612 627 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cca03g01644 693 PRINTS Haem peroxidase superfamily signature 484 501 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cca03g01644 693 PRINTS Haem peroxidase superfamily signature 502 514 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cca03g01644 693 Pfam Peroxidase 420 656 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cca03g01644 693 ProSitePatterns Peroxidases proximal heme-ligand signature. 550 560 IPR019793 -
Cca03g01644 693 PANTHER RNA LARIAT DEBRANCHING ENZYME 1 383 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca03g01644 Cca-Chr3 35448070 35456399 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca03g01644 402 692 Peroxidase AT4G31760 61.512 1.77e-133 394
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca03g01644 K18328 - gmx:100812726 759.985
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca03g01644 03 35448070 35456399 Cca03g01644 03 35448070 35456399 ECH