Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Cca03g01636 | ATGGCCGCTTTCtctgcttcttctctttttctccttttccttctctttggcttctcTGCAGCCAAGGAACTCTTGGTCGGAGGCAAGATAGATGCATGGAAGATTCCTTCTTCCGAGTCAGATTCCCTCAACCAATGGGCTGAAAAGTCTCGTTTCAGAGTCGGAGATCATCTTGTGTGGAAATATGAGAGTGGGAAGGACTCAGTGTTGGAGGTAACAAGGGAAGGTTATGCTAACTGCAACACCTCCAACCCCATTAAGGAGTACAGTGATGGGAACACAAAGGTGAAGCTGGAGCGTCCTGGAGCATTCTACTTCATCAGTGGAGCAAAGGGGCACTGTGAGAAGGGGCAAAAGGTGATTGTGGTGGTTATGTCTCCAAGGCACACATTCACTGCAGTGTCTCCAGCACCTTCTCCAGCAGAAATGGAAGGTCCAGCAGTTGCTCCTACTAGCAGTGCCACAATGTTGAAACTTGGCCTTTTCAGTGCTGTGGGAGTGTTGGCTATGTCTCTGGGTTTTCTCATGTAA | 531 | 0.452 | MAAFSASSLFLLFLLFGFSAAKELLVGGKIDAWKIPSSESDSLNQWAEKSRFRVGDHLVWKYESGKDSVLEVTREGYANCNTSNPIKEYSDGNTKVKLERPGAFYFISGAKGHCEKGQKVIVVVMSPRHTFTAVSPAPSPAEMEGPAVAPTSSATMLKLGLFSAVGVLAMSLGFLM | 176 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Cca03g01636 | 176 | Pfam | Plastocyanin-like domain | 33 | 118 | IPR003245 | GO:0009055 | |
| Cca03g01636 | 176 | CDD | OsENODL1_like | 22 | 125 | IPR041846 | - | |
| Cca03g01636 | 176 | PANTHER | EARLY NODULIN-LIKE PROTEIN 3 | 5 | 172 | - | - | |
| Cca03g01636 | 176 | SUPERFAMILY | Cupredoxins | 21 | 125 | IPR008972 | - | |
| Cca03g01636 | 176 | ProSiteProfiles | Phytocyanin domain profile. | 22 | 126 | IPR003245 | GO:0009055 | |
| Cca03g01636 | 176 | Gene3D | - | 20 | 129 | IPR008972 | - | |
| Cca03g01636 | 176 | PANTHER | BLUE COPPER PROTEIN | 5 | 172 | IPR039391 | GO:0009055 |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Cca03g01636 | Cca-Chr3 | 35398888 | 35399908 | Dispersed/Wgd |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Cca03g01636 | 8 | 174 | Phytocyanin Superfamily | AT2G25060 | 57.143 | 2.19e-64 | 194 |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Cca03g01636 | - | - | gmx:100305551 | 292.352 |
Event-related genes
| Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
|---|---|---|---|---|---|---|---|---|---|
| Cca03g01636 | 03 | 35398888 | 35399908 | Cca03g01636 | 03 | 35398888 | 35399908 | ECH | |
| Cca05g00767 | 05 | 21337445 | 21338884 | Cca03g01636 | 03 | 35398888 | 35399908 | PCT |