Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca03g01611 ATGAAGGGGTCTGTTCCAATAATCGATTATAAGCAAATAGAAAAAACGACCAATAATTTTCAGGAAAGTAACGTCTTAGGTGAGGGCGGTTTTGGACGTGTTTACAAGGCTCGCTTGGATCATAACTTGGATGTTGCCGTCAAGAGACTACACTGTGAGACTCAAAATGCTGAGAGAGAATTTGAGAACGAGGTGAATTTGCTGAGTAAAATTCAACATCCGAATATAATTTCCTTACTGGGTTGTAGCATTGATGGTGACACGAGGTTTATTGTCTATGAATTGATGCAAAATGGATCATTGGAGGCCCTTTTACATGGACCTTCTCATGGTTCGGCATTGACTTGGCACATGAGGATGAAGATTGCTCTTGACACAGCAAGAGGATTAGAATATCTGCATGAGAACTGTTACCCTGCAGTGATCCACAGAGACATGAAATCTTCTAATATTCTCTTAGATGCAAACTTCAATGCCAAGCTGTCTGATTTTGGTCTTGCCTTAACTGATGGGTCCCAAAGCAAGAAGAACATTAAACTATCGGGTACCTTGGGATACGTAGCCCCGGAGTATCTTCTAGATGGTAAATTAAGTGACAAAAGTGATGTGTATGCTTTTGGGGTTGTGCTATTGGAGCTCCTATTAGGAAGGAAGCCAGTGGAGAAACTGGCACCAGCTCAATGCCAATCTATTGTCACATGGGCCATGCCACAGCTCACGGACAGGTCCAAACTTCCGAACATTGTGGATCCAGTGATTAAGAATACAATGGATCCAAAGCACTTATACCAGGTTGCTGCTGTAGCTGTGTTGTGCGTGCAACCTGAGCCAAGTTACCGTCCACTGATCACAGATGTTCTTCACTCACTTGTCCCTCTTGTTCCCATTGAGCTTGGAGGAACACTAAGAGTTTCACAAGTGACACAGCATGCCTCTCTTGCTGATCCACCTGTGAATTCCCATTATTGA 969 0.4334 MKGSVPIIDYKQIEKTTNNFQESNVLGEGGFGRVYKARLDHNLDVAVKRLHCETQNAEREFENEVNLLSKIQHPNIISLLGCSIDGDTRFIVYELMQNGSLEALLHGPSHGSALTWHMRMKIALDTARGLEYLHENCYPAVIHRDMKSSNILLDANFNAKLSDFGLALTDGSQSKKNIKLSGTLGYVAPEYLLDGKLSDKSDVYAFGVVLLELLLGRKPVEKLAPAQCQSIVTWAMPQLTDRSKLPNIVDPVIKNTMDPKHLYQVAAVAVLCVQPEPSYRPLITDVLHSLVPLVPIELGGTLRVSQVTQHASLADPPVNSHY 322
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca03g01611 322 ProSitePatterns Serine/Threonine protein kinases active-site signature. 141 153 IPR008271 GO:0004672|GO:0006468
Cca03g01611 322 ProSiteProfiles Protein kinase domain profile. 20 291 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cca03g01611 322 SUPERFAMILY Protein kinase-like (PK-like) 5 290 IPR011009 -
Cca03g01611 322 ProSitePatterns Protein kinases ATP-binding region signature. 26 48 IPR017441 GO:0005524
Cca03g01611 322 PANTHER OS01G0750732 PROTEIN 2 311 - -
Cca03g01611 322 Gene3D Transferase(Phosphotransferase) domain 1 96 295 - -
Cca03g01611 322 SMART serkin_6 20 291 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cca03g01611 322 CDD STKc_IRAK 26 293 - -
Cca03g01611 322 Pfam Protein tyrosine and serine/threonine kinase 23 257 IPR001245 GO:0004672|GO:0006468
Cca03g01611 322 Gene3D Phosphorylase Kinase; domain 1 1 95 - -
Cca03g01611 322 PANTHER BNAA04G14780D PROTEIN 2 311 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca03g01611 Cca-Chr3 34986559 34990703 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca03g01611 7 317 Receptor kinase-like Gene Family AT3G58690 47.003 2.55e-95 286
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-X Cca03g01611 PK_Tyr_Ser-Thr 1.7e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca03g01611 - - gmx:100784795 593.964
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca05g00487 05 10796618 10803814 Cca03g01611 03 34986559 34990703 PCT