Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca03g01583 ATGTGTGCTTATAGTTCTCATTTGCTTGGAACATGCCTAGAAAAGAACACCAAGTTAACAAGTTACGTGGACACTGGGGATCGTGCATTTGGGGCAAACGGAAGATTCCTAATAACTACAACTTTCATCTACGTGGAGATCTTCATGGCCCTGGTTTCCTACACCATCTCATTGCTTGACAACTTGGCCAGAGTCTTCTGGGGGACACATCTGAAGCTGCAATTGGCAAAATTATCTACATCACAGCTTCGGACCATTGGTGCAGTGTTGATTGATCTGCCTAGTTTGTGGCTCAGGGATCTCTCTTCCATATATTTTCTTTCAACTGGTGGTATTTTAATGTCCCTTgtcaatttaatattataa 366 0.4126 MCAYSSHLLGTCLEKNTKLTSYVDTGDRAFGANGRFLITTTFIYVEIFMALVSYTISLLDNLARVFWGTHLKLQLAKLSTSQLRTIGAVLIDLPSLWLRDLSSIYFLSTGGILMSLVNLIL 121
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca03g01583 121 PANTHER OS05G0424000 PROTEIN-RELATED 1 119 - -
Cca03g01583 121 Pfam Transmembrane amino acid transporter protein 2 117 IPR013057 -
Cca03g01583 121 PANTHER AMINO ACID TRANSPORTER AVT1H 1 119 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca03g01583 Cca-Chr3 34593620 34593985 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca03g01583 4 117 Amino Acid or Auxin Permease AAAP Family AT5G16740 57.265 1.24e-32 116
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca03g01583 - - gmx:100787423 175.252