Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca03g01581 ATGACGCCGGACATAAATAAGCTCAACCAAAACAAAACACCCACACTTTGTTCAATTTCTTCTCTTCTTCTCTTCCCTAACACTTCCGTTTCGGAGGGAAACACAAAAGCAAATCACCTTTTTTTGTTTTTTTCTTTCTCTCAACACTTAGCAATGTTCGCCGAAGAGAATGGCCTCAGGGGAGACCCTAGGCTTCAAGCCATTTCCCAAGCCATCAGAGTCGTACCTCACTTCCCCAAACAAGGAATAATGTTCCAAGACATAACGACATTGCTGTTGGATCACAAGGCGTTTAAAGACACGGTCGACATTTTTGTCGATCGTTACAGAGACATGCACATTTCCGTTGTTGCCGGAATTGAGGCGAGGGGATTCATGTTTGGTCCCGCAATTGCGTTGGGCATTGGTGCCAAGTTTGTTCCTTTACGCAAACCCCGGAAGCTGCCAGGTGAAGTAATCTCAGAAAAATATGCTCTAGAATATGGAACTGATTGTTTGGAGTTGCATGTTGGTGCTGTCCAGCCGGGTGAACGGGCCATAGTCATTGATGACTTGGTGGCCACAGGTGGAACTCTGTCAGCAGGAGTAAAACTTCTAGAGCGTGTTGGTGCTGAAGTAGTGGAATGTGCTTGTGTCATTGGTGTGCCTGAGGTCAAGGGCCAGTGCAGGCTCATTGGAAAGCCACTTTATGTTCTTGTTGAGCCGCGTCAAGCAGATAAGTGTTGTTGA 729 0.465 MTPDINKLNQNKTPTLCSISSLLLFPNTSVSEGNTKANHLFLFFSFSQHLAMFAEENGLRGDPRLQAISQAIRVVPHFPKQGIMFQDITTLLLDHKAFKDTVDIFVDRYRDMHISVVAGIEARGFMFGPAIALGIGAKFVPLRKPRKLPGEVISEKYALEYGTDCLELHVGAVQPGERAIVIDDLVATGGTLSAGVKLLERVGAEVVECACVIGVPEVKGQCRLIGKPLYVLVEPRQADKCC 242
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca03g01581 242 SUPERFAMILY PRTase-like 71 227 IPR029057 -
Cca03g01581 242 Hamap Adenine phosphoribosyltransferase [apt]. 68 235 IPR005764 GO:0003999|GO:0005737|GO:0006168
Cca03g01581 242 TIGRFAM apt: adenine phosphoribosyltransferase 69 233 IPR005764 GO:0003999|GO:0005737|GO:0006168
Cca03g01581 242 PANTHER ADENINE PHOSPHORIBOSYLTRANSFERASE 52 239 - -
Cca03g01581 242 PANTHER ADENINE PHOSPHORIBOSYLTRANSFERASE 5-LIKE ISOFORM X1 52 239 - -
Cca03g01581 242 Pfam Phosphoribosyl transferase domain 94 216 IPR000836 -
Cca03g01581 242 Gene3D - 57 235 IPR029057 -
Cca03g01581 242 CDD PRTases_typeI 102 234 IPR000836 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca03g01581 Cca-Chr3 34571007 34575136 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca03g01581 62 234 PRT Gene Family AT1G27450 70.520 2.85e-90 262
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca03g01581 K00759 - gmx:100499904 369.777
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca03g01581 03 34571007 34575136 Cca03g01581 03 34571007 34575136 ECH
Cca03g01581 03 34571007 34575136 Cca05g00513 05 11564174 11567859 ECH
Cca05g00513 05 11564174 11567859 Cca03g01581 03 34571007 34575136 PCT