Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca03g01567 ATGCCTCATCTGCTACACGGAACGCTTAAGGTGACCATATATGAAGTTGATAGATTACATACTGGATGCCATTTCGATTTCTGCCAGAAGGACACTACACACAAGGGGAAGAGATTTCTGGCCCAAGTCAAGGGTTGTTTGCTGTGTCGGCCCGAGATTGTTGGGACAAGACTCTATGCAACAGTTGATTTAGACAAGGCGAGAGTTGGACGAACTCGAATGATAGGAAACCAACCCTCTCACCCAAAGTGGAACGAATCCTTTGAAATCTATTGTGCCCATCAAATCTCAAACATTATATTCACAGTGAAAGATGGTAACCCAATTGGAGCAACTCTGATTGGAAGAGCTTACATCCCCGTGGAGCAAGTTCTCAAGGGCTCCATAGTTAAGCGATGGGTTGAGATATTAGATGAAGAAGATCACCGTCCCGTACCAGGACACTCCAAAATCCGTGTCAGCGTGCAATTCTATGATGTTGCTGAGGACACAACATGCCTTTGGTCTCAGGGGATAAGCATGCCATTTTTTGGAGTTCCTCGTACATTTTTCAATCTAAGAGAAGGTTGTAATGTTACATTATACCAAGATGCTCATGCCCCACGTGGCATCAGTGTTGTCCCATTTATTCCAATATCTGAAGAAATAGACTACCTACCTGGAAGATGTTGGCAAGACATTTACAATGCCATTGTGGATGCTAAGCACTTTGTTTACATAGCTGGTTGGTCTATTTACACTGAAATAGCCTTAGTTAGAGATAGAGAGGAAGCAAATATCACCCTTGGTGAGTTACTTAAGAAGAAGGCTGATGAAGGTGTTAGAGTTCTTTTGCTTGTTTGGGATGACAGAACTTCTGTTCCAAATTTCAAAAAAGATGGCTTGATGGCAACACATGATCAGGAAACTGCTGCTTACTTTAGAAACACAAATGTGCATTGTATTTTGTGTCCACGAAACCCAGATGATGGAAGAAGCATAATTCAAGGCTTTCAAATCTCGACAATGTTCACTCATCACCAAAAAAGTGTAGTTGTTGATAGCCATGATGTAGGATCATCACAAAAACGAAGTGTCATAAGTTTCATAGGTGGAATTGATCTTTGTGATGGCAGGTATGATACCAGGGATCATCCTTTATTTTCAACATTAGGTACTGTACATCGAGATGATTTCCATCAGCCAAACTTCCCTGGTGCGTCCATCGATAAAGGTGGTCCAAGAGAGCCGTGGCATGACATTCATTGCAGGCTAGAAGGACCTATTGCTTGGGATGTCCTATACAATTTTGAGCAAAGATGGGAGAAGCAAGTTGGGAAGGAATTATTACTCTCACTTGATGATCATGATCAAATTCTGGTCCACCCATCTGAAGCAAAGATATCAGATGTAGGAGAAAAAGATACATGGACTGTTCAATTGTTTAGATCCATTGATGGTGGTGCTGCTTTTGGCTTTCCCCAGACCCCAGATGAAGTTGCTGAATTAGGCCTTGTTAGTGGGAAAGACAATGTCATTGAGAGAAGCATTCAAGATGCCTATATTAATGCTATTAGGCGTGCAAAAAATTTCATCTACATTGAGAACCAATACTTCCTTGGGAGTTCATATAGCTGGAAAGCAAGTGATGGTATTGTGGTTGAGGACATTGGTGCTTTGCATCTCATACCAAAGGAATTGTCATTGAAGATTGTAAGCAAGATCAAAGCACGAGAAAGGTTTTCTGTGTACATAGTGATCCCAATGTGGCCCGAAGGTATACCTGAAAGTGAATCAGTTCAAGCAATATTAGATTGGCAAAAGAGGACCATGGATATGATGTATTCTGACATTGCTAATGCCTTAAAGACAATGGGGATTCAAGCACATCCTCGTGATTATTTGTCATTTTTTTGCCTTGGCAATAGGGAGCACAAGGAAGCAGTAGAGTATACTCCTCCACAGGAACCAGATCCTGATACTGACTATAAAAGAGCACAAAATGCTAGGAGGTTTATGATCTATGTTCATTCCAAGATGATGATAGTTGACGACGAATACATAATCATTGGTTCTGCTAACATAAATCAGAGATCAATGGAGGGTGCAAGAGACACTGAGATTGCAATGGGTGCATTCCAACCACGTCATCTAGCATCGAATGGACGACCCAGAGGAGACATTTATAGGTTTCGACGTGCACTATGGTATGAGCACCTTGGGGATAGTGGTATTAACACAAAAATCTTTGATAATCCAGAACATTTGGATTGCATCACCCTTGTGAATAGTCTTGCTGAGACTAACTGGGACCTGTACTCAAAGGAAACATTTGATAAAAATAGAATTTTCCACCTCATGTGCTACCCCATACAAGTAACCTACGATGGAGCCATAACAACCTTTCCAGGGTTTGAGCATTTTCCTGACACCAAAGCTCCAATTTTGGGTTGCAAATCAAAAATCCTTCCTCCAATTCTCACCACCTAG 2469 0.4147 MPHLLHGTLKVTIYEVDRLHTGCHFDFCQKDTTHKGKRFLAQVKGCLLCRPEIVGTRLYATVDLDKARVGRTRMIGNQPSHPKWNESFEIYCAHQISNIIFTVKDGNPIGATLIGRAYIPVEQVLKGSIVKRWVEILDEEDHRPVPGHSKIRVSVQFYDVAEDTTCLWSQGISMPFFGVPRTFFNLREGCNVTLYQDAHAPRGISVVPFIPISEEIDYLPGRCWQDIYNAIVDAKHFVYIAGWSIYTEIALVRDREEANITLGELLKKKADEGVRVLLLVWDDRTSVPNFKKDGLMATHDQETAAYFRNTNVHCILCPRNPDDGRSIIQGFQISTMFTHHQKSVVVDSHDVGSSQKRSVISFIGGIDLCDGRYDTRDHPLFSTLGTVHRDDFHQPNFPGASIDKGGPREPWHDIHCRLEGPIAWDVLYNFEQRWEKQVGKELLLSLDDHDQILVHPSEAKISDVGEKDTWTVQLFRSIDGGAAFGFPQTPDEVAELGLVSGKDNVIERSIQDAYINAIRRAKNFIYIENQYFLGSSYSWKASDGIVVEDIGALHLIPKELSLKIVSKIKARERFSVYIVIPMWPEGIPESESVQAILDWQKRTMDMMYSDIANALKTMGIQAHPRDYLSFFCLGNREHKEAVEYTPPQEPDPDTDYKRAQNARRFMIYVHSKMMIVDDEYIIIGSANINQRSMEGARDTEIAMGAFQPRHLASNGRPRGDIYRFRRALWYEHLGDSGINTKIFDNPEHLDCITLVNSLAETNWDLYSKETFDKNRIFHLMCYPIQVTYDGAITTFPGFEHFPDTKAPILGCKSKILPPILTT 822
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca03g01567 822 ProSiteProfiles C2 domain profile. 1 134 IPR000008 -
Cca03g01567 822 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 335 372 IPR001736 GO:0003824
Cca03g01567 822 SMART pld_4 665 692 IPR001736 GO:0003824
Cca03g01567 822 SMART pld_4 335 372 IPR001736 GO:0003824
Cca03g01567 822 Pfam Phospholipase D Active site motif 666 692 IPR001736 GO:0003824
Cca03g01567 822 Pfam Phospholipase D Active site motif 335 372 IPR001736 GO:0003824
Cca03g01567 822 SUPERFAMILY Phospholipase D/nuclease 179 444 - -
Cca03g01567 822 Gene3D Endonuclease Chain A 484 709 - -
Cca03g01567 822 SMART C2_3c 8 133 IPR000008 -
Cca03g01567 822 PIRSF PLD_plant 1 822 IPR011402 GO:0004630|GO:0005509|GO:0016020|GO:0046470
Cca03g01567 822 Gene3D Endonuclease Chain A 216 456 - -
Cca03g01567 822 SUPERFAMILY Phospholipase D/nuclease 498 734 - -
Cca03g01567 822 PANTHER PHOSPHOLIPASE D ALPHA 3 2 822 - -
Cca03g01567 822 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 4 160 IPR035892 -
Cca03g01567 822 Pfam C2 domain 8 135 IPR000008 -
Cca03g01567 822 Gene3D C2 domain 5 169 IPR035892 -
Cca03g01567 822 CDD C2_plant_PLD 1 158 - -
Cca03g01567 822 PANTHER PHOSPHOLIPASE D 2 822 IPR015679 -
Cca03g01567 822 Pfam Phospholipase D C terminal 741 812 IPR024632 -
Cca03g01567 822 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 665 692 IPR001736 GO:0003824
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca03g01567 Cca-Chr3 34405953 34412232 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca03g01567 3 822 Phospholipase D Gene Family (Wang group) AT3G15730 63.702 0.0 1053
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca03g01567 K01115 - gmx:100794115 1414.44