Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca03g01549 ATGTCATCAGTGTCGTCAGTATCTCGCGTTTTCGACACCATTAATGAATGTCTCTCCCAAGTTCATTCAGACTCCATCGAAGTTCAAGAGAAAGCCCTTCAAACCTTGGCATCCATCACGAAAGTGAGTCCCCAGAACAGAACCCTAGTGGCTCAAACAGACAAAGCCATCGCAACACTAGCCACACTAACAAACGCATCCAACCCCACCATCCAAACACTCTCCTTGTTGATCCTCTTCAACCTATCCCTAAACCCCGACTTGAAGCACTCTCTCTCCGACATGGAAACCATTCACTACCTCAACTCCCTCATCACCTCATCATCGTGCTCCCTCGACTCCTCAAAGCTAGCCTCGTCATTGATCTGCAGCCTCGCCATGCACGACAAGAACAAGGCCAAGTTTGGTGTGGCGGGAACAGTTCAGTTGCTAGTGAGAGCCATTGAAGGCTCTCGTGGCTCCGATGCACACCACCTCCTGAGTTCCTTGGCTGAGCTTGTCCACTTCCATGGAAACTGCACTTTGGCAGTGCGAGCCGGGGCGATTCAAGTGCTGCTTAGGGTTGTGCAGAGCACCGAGAGTGAGGACTTGGCTGGAACTTCTCTTGCGGTTCTTGGACTCCTTGCGAGGTTCGAGGAAGGGTTGAATGGTTTGAAGAGAAGGGATCACGAGATAGTTAGGGCTATGTTGAGCGTGTTGAAAGGGAGGTCGCTGTTGAGTAAGGAGGGTGCTGCTGATATCCTTATAAGGCTTTTTGATGACAGTGAAGAGTGTGTCGCTGAGGCTCTCATGTTGCCCGAGTTTTCAAGCGTGTTGGCTGATCTTTGTGTGAGAGGGTCGGTGAGGGTTCGAGACAAGGCGGATTTGTTGATGACGAAGATGGCCAAGTTGAGCTTGGACTCTGACATGGAAGCATGCTCTCTGCATGGTTATTAA 936 0.5064 MSSVSSVSRVFDTINECLSQVHSDSIEVQEKALQTLASITKVSPQNRTLVAQTDKAIATLATLTNASNPTIQTLSLLILFNLSLNPDLKHSLSDMETIHYLNSLITSSSCSLDSSKLASSLICSLAMHDKNKAKFGVAGTVQLLVRAIEGSRGSDAHHLLSSLAELVHFHGNCTLAVRAGAIQVLLRVVQSTESEDLAGTSLAVLGLLARFEEGLNGLKRRDHEIVRAMLSVLKGRSLLSKEGAADILIRLFDDSEECVAEALMLPEFSSVLADLCVRGSVRVRDKADLLMTKMAKLSLDSDMEACSLHGY 311
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca03g01549 311 Gene3D - 4 304 IPR011989 -
Cca03g01549 311 PANTHER U BOX DOMAIN-CONTAINING 6 303 - -
Cca03g01549 311 PANTHER KINESIN-ASSOCIATED PROTEIN 6 303 - -
Cca03g01549 311 SUPERFAMILY ARM repeat 13 295 IPR016024 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca03g01549 14 287 U-box Gene Family AT1G23030 23.466 1.47e-11 63.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca03g01549 - - gmx:121174819 475.322
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca03g01549 03 34207910 34209008 Cca03g01549 03 34207910 34209008 ECH