Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca03g01532 ATGGAGGAAACTCAAGGGCTCAATTGTTGCAGTAAAAGTGAAAGTAGGAGCTCTAGTGAGACTCGACCTCCCAATCCCAACCCACCTTCATATCGCCAATGCAAACTTGTTCGCCACGCTTCTCTTATGAAAACAAAGTTGTCTGATGTATCTGCTGATCCGGGGCTTGTTACTGAAGATGGTCAGTCTGATTTCTTTCCAATGCTTCGTTCTGGAGCATGTGCTGATATTGGATTCCGGTCAAGTATGGAAGATGTATATGTTTGTGTCGACAATTTTATGCAGGATTATGGGCTCGAGAACCATATAGATGGACCCAGTGCTTTCTATGGGGTATTTGATGGACACGGTGGAAAGCATGCTGCTGACTTTGCTTGCCATCACCTACCAAAGTTCATTCTTGAGGACGAAGGTTTCCCTAGAGATATTGAAAGGATAGTTTCTTCAGCATTTTTGCAAACAGACAATGCCTTTGCAGATGCTTGCTCTCTGGATGCTACACTTGCATCTGGCACCACTGCATTAGCCACTCTTGTAATAGGAAGGTTGCTGGTGGTGGCAAATGCTGGAGATTGTCGTGCTGTGCTGTGCCGTCGTGGAAAAGCAATTGAAATGTCGAGAGATCACAAACCGATTTGCAACAAAGAGAAGAAGCGCATTGAGGCATCTGGGGGGCATGTTTATGATGGATATCTTAACGGACAACTTAATGTTGCTCGTGCACTTGGTGACTGGCACATGGAAGGAATGAAGAGCAAAGAAGGTGGACCACTGACGGCAGAACCTGAACTTATGACTACAAAACTGACTGCTGAGGATGAATTTCTGATCATAGGTTGTGATGGGATTTGGGATGTATTTAGGAGCCAAAATGCAGTGGATTTTGCTCGGCGCAGGCTTCAGGAACATAACGACCCAACCATGTGTAGTAAGGATCTGGTTGATGAGGCTTTAAAGAGAAAAAGTGGAGACAATTTGGCTGCAGTTGTGGTATGCTTCCAGCAGCAACCTCCTCCTAACTTGGTGGCGCCGCGCTCTAGAGTGCAACGGAGCTTCTCTGCTGAAGGTTTGAAGGAATTGCAAAGCTTCCTGGACAGCTTGGGTAATTGA 1110 0.4595 MEETQGLNCCSKSESRSSSETRPPNPNPPSYRQCKLVRHASLMKTKLSDVSADPGLVTEDGQSDFFPMLRSGACADIGFRSSMEDVYVCVDNFMQDYGLENHIDGPSAFYGVFDGHGGKHAADFACHHLPKFILEDEGFPRDIERIVSSAFLQTDNAFADACSLDATLASGTTALATLVIGRLLVVANAGDCRAVLCRRGKAIEMSRDHKPICNKEKKRIEASGGHVYDGYLNGQLNVARALGDWHMEGMKSKEGGPLTAEPELMTTKLTAEDEFLIIGCDGIWDVFRSQNAVDFARRRLQEHNDPTMCSKDLVDEALKRKSGDNLAAVVVCFQQQPPPNLVAPRSRVQRSFSAEGLKELQSFLDSLGN 369
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca03g01532 369 ProSiteProfiles PPM-type phosphatase domain profile. 70 333 IPR001932 -
Cca03g01532 369 SMART PP2C_4 60 331 IPR001932 -
Cca03g01532 369 Gene3D - 57 337 IPR036457 -
Cca03g01532 369 PANTHER PROTEIN PHOSPHATASE 2C 49 355 IPR015655 GO:0004722|GO:0006470
Cca03g01532 369 SUPERFAMILY PP2C-like 65 335 IPR036457 -
Cca03g01532 369 MobiDBLite consensus disorder prediction 1 21 - -
Cca03g01532 369 MobiDBLite consensus disorder prediction 1 32 - -
Cca03g01532 369 PANTHER PROTEIN PHOSPHATASE 2C 27-RELATED 49 355 - -
Cca03g01532 369 ProSitePatterns PPM-type phosphatase domain signature. 109 117 IPR000222 GO:0043169
Cca03g01532 369 Pfam Protein phosphatase 2C 72 325 IPR001932 -
Cca03g01532 369 CDD PP2Cc 70 333 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca03g01532 Cca-Chr3 33994558 33997818 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca03g01532 1 369 PP2C-type Phosphatase Gene Family AT2G25620 67.848 0.0 536
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca03g01532 K14803 - gmx:100815725 684.871