Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca03g01523 ATGGCGATGCTGAGAATGGCCATGCCTCACAATGCCAACAACACTTCCAACCATCAATTCGTGCTCCATGACTTTCTCGGCATGAAGTCCGCCGCTGATTCCCCCAAAACCGCCGATGTCAGGCTGCCGGAGCCCTCCGCTTCCGCCTCCTCCGCCGGAGCACGTGGCCCCTTCTCCTCCACCTCTGACATCGCTTCCGAGAAACAGGTAGGAAATCATCTAGAGGGAGTTCCATTCTATGGCCCGAGGAGTGATTTTTCTGGCACTGAGATAAGTAACAGATTAGTGGGAAGCAAGAGAAGTAATTCTGATTCCACTTTTATGGGTTCCTCCAGAGATGCCTTCCAAATGGTCCCTGATTCCTTTCAAAACTCACATTTGATGAAGGTCCTTCGGAATGCAGCTGGAGGAGAGAGGTCTAGGAGACCCAATGACGATGAAGTGTTACTTGGTATGCAGTCAATGAAGCCATCTTCTTCCCAGATATTTCAGCCTCCCACAAGCACTAAGATTGATGCGAATAAGTGGGAGCGATCCATTCTCATGAATGTTGGCCCATCCATGCAGCATCCGCCGCGTGGAGGGCAATTGGCGCCTTTTGTGCACCAAATGGCTTCGAGCAAGATTAGGGATACCAATGCTGGTCCTTCATTCATCTCTCAGTCAGCTGCTGATGAAGGATCTAGAACTGGAATCAAGGGCCCTGGAATTTTAAGTTCTATGAATACAAATGCTACAGCCACTGAGAAAGCTTCATCTGCAGTGCTGCTTGGTGGCTGCAGGCCGAAGCCTGTAACTAATATAATAGAGTCATCCACACCTCCAAGCAGTCAACATGGGCTAACATCTGCCAGTCGCCAGATGACTATTTTTTATGGAGGCCAAGCTCATGTTTTTGATGATGTTCACCCTCATAAGGCAGATGTTATAATGGCTTTGGCTGGTTCAAATGGTGGATCTTGGTCCACTGCATTCTCACCTAAATCTGCTGCAAAGATGGTTAGTGACGGTAACTTGCACACCGGAGAAAATGAAACAGGTGTAGTGAGTAATGTGGCGTTCCCACACGAGCTTCATGGAAAATTGTCTATTACTGGCAGTTCTAGCCATGCCGTCGGGCCCGGTGATCGAGTGTCTACTCCAGCAGGGGCACACCAAGGAAGCGTTTTTGCGATAGATACTAGAAATCCAGTCCAACCACCAGATCCGAGTTCTGAAGACAAAAGAGCACAGTGA 1236 0.4895 MAMLRMAMPHNANNTSNHQFVLHDFLGMKSAADSPKTADVRLPEPSASASSAGARGPFSSTSDIASEKQVGNHLEGVPFYGPRSDFSGTEISNRLVGSKRSNSDSTFMGSSRDAFQMVPDSFQNSHLMKVLRNAAGGERSRRPNDDEVLLGMQSMKPSSSQIFQPPTSTKIDANKWERSILMNVGPSMQHPPRGGQLAPFVHQMASSKIRDTNAGPSFISQSAADEGSRTGIKGPGILSSMNTNATATEKASSAVLLGGCRPKPVTNIIESSTPPSSQHGLTSASRQMTIFYGGQAHVFDDVHPHKADVIMALAGSNGGSWSTAFSPKSAAKMVSDGNLHTGENETGVVSNVAFPHELHGKLSITGSSSHAVGPGDRVSTPAGAHQGSVFAIDTRNPVQPPDPSSEDKRAQ 411
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca03g01523 411 MobiDBLite consensus disorder prediction 36 63 - -
Cca03g01523 411 MobiDBLite consensus disorder prediction 365 411 - -
Cca03g01523 411 Pfam tify domain 283 315 IPR010399 -
Cca03g01523 411 ProSiteProfiles Tify domain profile. 281 316 IPR010399 -
Cca03g01523 411 PANTHER PROTEIN TIFY 8 54 410 - -
Cca03g01523 411 PANTHER PROTEIN TIFY 4A-RELATED-RELATED 54 410 IPR040390 -
Cca03g01523 411 SMART tify_2 281 316 IPR010399 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca03g01523 15 314 Tify Gene Family AT4G32570 41.456 1.30e-56 188
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Tify Cca03g01523 tify 2.6e-15 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca03g01523 - - gmx:100807222 722.62