Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Cca03g01500 | ATGGAGGATCAGGCGAATCACGCTACACCGCCGCGGGATGAAGAGGAGGATTCTAAGAAGGAAGAAGAGGAATTGATTGCAAAGGTTAACAAACTCATGGATAAGATCACTTCCGCACCTGATAACCCTAAAGCCACCGTTCTCCACGCCCTTGCTTCCATTCTCGAAACGCAAGAGTCACGATACATGGACGAGAATGGTCATTCTTCTTCGAGCAATGCTCGTGCTGCGCATATCATTGGCCGCCTTGGCGGCTTAATCCGGGAAAATGATGAGTTCTTTGAGTTGATATCGTCGAAGTTTCTTTTAGAAACAAGATACTCGACTTCCATTCAAGCTGCTGCTTGTAGGCTTCTCCTATGCTGTTCACTAACTTGGATTTATCCTCATGTTTTTGAAGAATCCGTCATGGAAAACATAAAAAATTGGGCGATGGATGATAACCCTAGGGTGTCTGCTGAAGAGCAGAATCTGAAGCATAATCCTGACAGGAGGGAGGCATCAGATTCTGAAATGTTGAAAACTTATTCTACTGGACTCCTTGCTGTGTGTTTGGTCGGTGGAGGTCAAATAGTGGAAGATGTATTGACATCTGGCTTGTCTGCTAAGCTTATGCGTTATCTTCGTTTACGAGTGCTGGGAGAGACCAGTAGCAGCCAGAAAGATGTTACTCATATAACAGAGAGTAGGCATGCATCTGCAAATACTTCAGGAAGAGGTAGAGATGATGGTCGCGGAAGATTTCGCCAGCTCCTGGAATCTAATCATTTGGATGATACTAGGAAGATTGACGAGAGATCTTTAGATGATGTAACTCTTGAAAGGGGTCCGGATAGAAGCATTAGTGGACAAACTTGCCCAGATGGATCTTGGATAGATGGTGAACCACCCGATGAGTTTGGTGAAGGTGCTGATGTCCGCGAGGTAGATTCTGATGGAGAGGATAGATGGCGTTGTAGAGATATACGTGATGGAAGGATAAAATATGGTGAGCATGACGACAATGTTAGGGATGACTCTTCGAGGCGGCGTGCAAACCGTGGATGGGGGAGATCTAGAGGGAAAGGAAGGATCAATGAAGGGACTGTAGAAAGTGATCCCATTTTGTCATCTCCTGGTTCTGGTAGTCGATTAGGACTGGGACGGAGTGTTAGAGATAGAAGCATATTGAGGAATGCTGACATTAGGAGGGTGGCTGATTCTAAGAAGACCCTTGGTAGGTCCCCTTCTTCTTTTGAAAGAGAGGATAATGATGATTGTTTCCAAGAGTGCCGAATTGGAAGTAAAGACATAACCGATCTTGTCCGAAAAGCAGTTCAAGCTGCTGAAGCTGAAGCTAGATCAGCCAATGCACCTGAAGAAGCTGTGCAAGCAGCTGGGGATGCTGCTGCTGATCTTGTAAAAACTGCAGCTTCAGAGGAATATAAATCCTCTAATGATGAAGAAGCTGCTTTTTTGGCTGCTTCAAGAGCTGCATCAACTGTTATCGAGGCTGCATCTGCAGTTGAAGTTTCAAGGATTTCTATATGCGACAATACTATAACAGAGAATATGAGTGGCAAAGAATCCGAAACTAATGAGGATGTTGAAGAGTACTTCATCCCAGATACTCAATCACTTGCACAGTTGAGAGAAAAATATTGCATTCAGTGTCTCGAGTTACTAGGAGAATATGTAGAAGTTCTTGGCCCTGTGTTGCATGAGAAGGGAGTTGATGTGTGTCTTGCACTTCTACAGCAGAATTCTAAACATCGGGAGGCATCCAAAGTTGCTTTGCTGTTGCCTGATGTCATGAAGCTAATATGTGCTTTAGCTGCACATAGGAAATTTGCTGCACTATTTGTGGACCGTGGGGGAATGCAAAAGCTGCTTGCTGTCCCTAGAATGGCTCAAACCTTCTTTGGCCTTTCTTCTTGTCTATTTACTATTGGTTCTCTTCAGGGGATAATGGAACGGGTTTGTGCTCTTCCATCAGAAGTTGTTTATCATGTTGTTGAGTTAGCTCTCCATCTCCTTGACTGCAATCAAGACCAAGCCCGGAAGAATGCAGCATTGTTTTTTGCTGCTGCATTTGTCTTCAGAGCAGTTCTTGATGCCTTTGATTCCCTGGATGGATTACACAAATTACTGGGGCTTCTAAATGATGCTGCTTCAGTAAGATCAGGAGTAAATTCTGGAGCCTTGAGTTTATCTAACTCAGGATCGCTTCGAAATGATCGATCATCTGCGGAAGTGCTGACATCATCTGAGAAGCAGATTGCTTATCACACTTGTGTTGCTTTGCGGCAATATTTCAGGGCTCATCTCCTTGTATTAGTGGATTCTATTCGTCCAAACAAAAGCAATCGTAGTGCTGCTAGAAATATTCCAAGTGTAAGGGCTGTGTACAAGCCACTTGATATTAGTAATGAGGCAATGGATGCAGTATTCCTGCAATTACAAAAAGATCGGAAGCTAGGTCCTGCATTTGTGAGAACACGTTGGCTAGCAGTTGAGAAGTTCTTGGCATCTAATGGACATGTTACTATGTTGGAATTGTGTCAGGCCCCACCTGTGGAGCGATATCTTCATGATTTGCTTCAGTATGCGTTGGGTGTTCTTCACATTGTTACATTGGTACCTAGCAGTCGTAAGATGATTGTAAATGTAACATTAAGCAATAATCGTGTCGGTATTGCAGTAATTTTGGATGCTGCAAATATAGTTAGTAATCACGTGGACCCTGAGATAATTCAACCAGCATTAAATGTCTTGGTCAATCTTGTTTGCCCTCCTCCTTCAATCAGCAATAAGCCAGCTATGGTTGGACAAGGTCAGCAGTTGGCGCCTTCACAAACATCTAATGGTCCTCCCTCCGAGGCTAGAGATAGAAATGCTGAACGTAATGTCTCAGATCGAGCTGTTCACTTTACTAGCCAGACTGATCCTAGGGAGAGGAATGGGGAGTCCAATGCTGTAGATCGAGGCAGTGCTGCAGGATCCAGTACACTGCCTGTTAATAGTACTCCACAAACTCCTGTTGCTTCAGCAACCTCAGGATTGGTTGGCGACCGAAGAATATCATTGGGTGCTGGAGCTGGTTGTGCTGGTCTTGCTGCTCAATTGGAACAAGGATATCGTCAGGCAAGAGAGGCTGTACGCTCTAATAATGGTATCAAGGTTCTTCTGCATCTTCTCCAACCGCGCATATATTCTCCTCCTGCTGCTCTAGATTGTCTTCGTGCTCTATCATGTCGAGTCTTGCTTGGATTAGCCAGAGATGATACTATTGCACACATATTGACCAAGCTTCAGGTTGGGAAAAAGCTGTCAGAACTGATTCGGGATTCAGGCAGCCAAACACCTGGAACAGAGCAGGGTAGATGGCAAACTGAACTTTCCCAGGCTGCGATTGAGCTTATTGGGATTGTGACTAATTCAGGACGTGCCAGTACATTAGCTGCTACTGATGCAGCTACTCCTACTTTAAGGCGTATAGAAAGAGCTGCTATAGCTGCTGCCACTCCTATTACTTACCATTCAAGGGAACTCTTGCTCCTAATTCATGAACACCTGCAAGCATCTGGAATGACACAAACTGCTTCTTTGTTGCTCAAAGAGGCTCAGTTGACTCCTTTGCCATCATTGGTTGCTCCATCTTTTCTTGCACAACAGCCCACCTCACAGGAAGTTTCTTCAACACAAATTCAGTGGCCCTCTGGTCGTACTCCTTCTGGATTTCTCTCTAACAAATTAAAAGTTAATGCGAAGGATGAGGATGCTAGCTTGAAAAGTGATTCTATTTCTGCAAAGAAAAAATCACTGACTTTCTCATCATCTTTTCATTCAAGACTGCAACTTTACTCTCAGCAATTATCAGTCAGTAAATGGTCAAGTACTGGTAAAGAGTCTTCAGAAACTAGTGCAGTAGATACTACATCTGAATCTTTGGTGAAAAATAATATTGATACTGGATCTCTGTTTAAGACTCCTATTTCCTTGCCAGCAAAACGTAAGTTATCTGATATAAAGGATATAGCAATGTTTTCAGCTTCTGGAAAACGACTAAATATTGGGGATCAAGGACTTCGCTCTCCTATATGTTCAAGTGCAATTCGTAAAAGCAGCCTGCAGACTGATGCTGTTGGGCTTGTCACACCAATTTGTAACTTGAGAAATCAACAGAGCCGTTGTATGGGTGATTTTGTGGATGAGAATCAGTACAATACTCCAAATACAGGTCAGATGACACCATCCTCCCAAGTATTGAATGATCTTCAGCCCAACAACCCTGAGCGTGTAACACTGGATTCGCTAGTGGTTCAGTATCTGAAGCATCAGCATCGCCAATGTCCAGCTCCTATTACCACTCTTCCTCCACTGTCTCTGCTGCATCCACATGTCTGCCCTGAACCAAAGCGAAGCCTTGATGCTCCTTCTAATGTGACTGCTCGACTTGGTACACGGGAATTTAAATACATGTATGGTGGAGTGCATGGGAATCGTAGGGATCGGCAATTTATTTACAGTCGGTTTAGGCCGGGGCGTCCTTGTCGGGATGATGCCGGTGCCTTGTTAACATGCATTACATTTGTTGGGGACTCTTCTCACATTGCTGTTGGTAGCCATAATGGAGAGCTCAAATTTTTTGACTCCAACAACAGCAATGTTGTCGAGAGCTACACTGGTCATCAGTCTCCTTTGACTCTTGTTCAGTCTTTCGTTTCTGGTGAGACCCAACTATTGCTTTCTTCAAGCTCCCAAGATGTTAGGTTGTGGGATGCATCATCAATTTTAGGAGGTCCTAGCCATTCATTTGAAGGATGCAAGGCTGCCAGGTTCAGCAATTCTGGGAGTGTTTTTGCAGCCTTGTCATCAGAATCTGCACGACGGGAAATCCTCTTGTATGATATCCAATCTTGTCATTTAGAATCAAAGTTGTCAGATACATATGCAACTTCTACAGGGCGGGGTCATGTTTATTCTTTAATCCATTTTAACCCTTCTGACTCAATGTTGCTTTGGAATGGTGTTTTATGGGACCGGAGGGTTTCTAGGCCTGTTCATCGCTTTGATCAGTTTACAGACTATGGTGGTGGAGGCTTTCATCCTGCTGGCAACGAGGTTATTATTAACTCTGAAGTCTGGGATTTGCGCAAGTTCAGATTGCTTCGCAGTGTACCTTCATTAGATCAAACATCAATAACATTCAATGCACGAGGTGATGTAATGTATGCAATCTTGAGGAGAAATCTTGAGGATGTAATGTCAGCAGTCCACACTCGTCGTGTCAAACATCCTCTGTTTGCGGCTTTCCGCACAGTGGATGCAATCAATTATTCAGACATTGCTACTATCCCTGTGGACCGATGTGTTCTTGATTTTGCAGCCGAGCCAACAGATTCATTTGTTGGTCTGGTTACTATGGATGATCAGGATGAGATGTATGCTTCAGCCAGAATCTATGAAATTGGTCGTCGGAGGccaactgatgatgattctgatcctgatgatgctgaaagtgaggaggaagatgaggatgatgacgatgatgatgttgatgtagatccccttttaggccctggtcttggtggtgatagtgcgagtgatgctgatgacttgagcaatgatgacgatgatgatgacagcgcgagcgatctcgatgaagatgaagatggagatttcattttggatgatgtagACTTCGATGAAGGACCTGGCATATTGGAGATTGTGACAGAAGGTGACGAGGATGATGATGATAGTCAGATACTTGAGTCCTTAAGTAGTGACGATGAGGATTTTGTTGGTAATGGCTTTGGGTATTAA | 5808 | 0.423 | MEDQANHATPPRDEEEDSKKEEEELIAKVNKLMDKITSAPDNPKATVLHALASILETQESRYMDENGHSSSSNARAAHIIGRLGGLIRENDEFFELISSKFLLETRYSTSIQAAACRLLLCCSLTWIYPHVFEESVMENIKNWAMDDNPRVSAEEQNLKHNPDRREASDSEMLKTYSTGLLAVCLVGGGQIVEDVLTSGLSAKLMRYLRLRVLGETSSSQKDVTHITESRHASANTSGRGRDDGRGRFRQLLESNHLDDTRKIDERSLDDVTLERGPDRSISGQTCPDGSWIDGEPPDEFGEGADVREVDSDGEDRWRCRDIRDGRIKYGEHDDNVRDDSSRRRANRGWGRSRGKGRINEGTVESDPILSSPGSGSRLGLGRSVRDRSILRNADIRRVADSKKTLGRSPSSFEREDNDDCFQECRIGSKDITDLVRKAVQAAEAEARSANAPEEAVQAAGDAAADLVKTAASEEYKSSNDEEAAFLAASRAASTVIEAASAVEVSRISICDNTITENMSGKESETNEDVEEYFIPDTQSLAQLREKYCIQCLELLGEYVEVLGPVLHEKGVDVCLALLQQNSKHREASKVALLLPDVMKLICALAAHRKFAALFVDRGGMQKLLAVPRMAQTFFGLSSCLFTIGSLQGIMERVCALPSEVVYHVVELALHLLDCNQDQARKNAALFFAAAFVFRAVLDAFDSLDGLHKLLGLLNDAASVRSGVNSGALSLSNSGSLRNDRSSAEVLTSSEKQIAYHTCVALRQYFRAHLLVLVDSIRPNKSNRSAARNIPSVRAVYKPLDISNEAMDAVFLQLQKDRKLGPAFVRTRWLAVEKFLASNGHVTMLELCQAPPVERYLHDLLQYALGVLHIVTLVPSSRKMIVNVTLSNNRVGIAVILDAANIVSNHVDPEIIQPALNVLVNLVCPPPSISNKPAMVGQGQQLAPSQTSNGPPSEARDRNAERNVSDRAVHFTSQTDPRERNGESNAVDRGSAAGSSTLPVNSTPQTPVASATSGLVGDRRISLGAGAGCAGLAAQLEQGYRQAREAVRSNNGIKVLLHLLQPRIYSPPAALDCLRALSCRVLLGLARDDTIAHILTKLQVGKKLSELIRDSGSQTPGTEQGRWQTELSQAAIELIGIVTNSGRASTLAATDAATPTLRRIERAAIAAATPITYHSRELLLLIHEHLQASGMTQTASLLLKEAQLTPLPSLVAPSFLAQQPTSQEVSSTQIQWPSGRTPSGFLSNKLKVNAKDEDASLKSDSISAKKKSLTFSSSFHSRLQLYSQQLSVSKWSSTGKESSETSAVDTTSESLVKNNIDTGSLFKTPISLPAKRKLSDIKDIAMFSASGKRLNIGDQGLRSPICSSAIRKSSLQTDAVGLVTPICNLRNQQSRCMGDFVDENQYNTPNTGQMTPSSQVLNDLQPNNPERVTLDSLVVQYLKHQHRQCPAPITTLPPLSLLHPHVCPEPKRSLDAPSNVTARLGTREFKYMYGGVHGNRRDRQFIYSRFRPGRPCRDDAGALLTCITFVGDSSHIAVGSHNGELKFFDSNNSNVVESYTGHQSPLTLVQSFVSGETQLLLSSSSQDVRLWDASSILGGPSHSFEGCKAARFSNSGSVFAALSSESARREILLYDIQSCHLESKLSDTYATSTGRGHVYSLIHFNPSDSMLLWNGVLWDRRVSRPVHRFDQFTDYGGGGFHPAGNEVIINSEVWDLRKFRLLRSVPSLDQTSITFNARGDVMYAILRRNLEDVMSAVHTRRVKHPLFAAFRTVDAINYSDIATIPVDRCVLDFAAEPTDSFVGLVTMDDQDEMYASARIYEIGRRRPTDDDSDPDDAESEEEDEDDDDDDVDVDPLLGPGLGGDSASDADDLSNDDDDDDSASDLDEDEDGDFILDDVDFDEGPGILEIVTEGDEDDDDSQILESLSSDDEDFVGNGFGY | 1935 |
Showing 1 to 1 of 1 entries
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Cca03g01500 | 1935 | MobiDBLite | consensus disorder prediction | 219 | 234 | - | - | |
| Cca03g01500 | 1935 | PANTHER | VPRBP PROTEIN-RELATED | 13 | 259 | IPR033270 | GO:0016567 | |
| Cca03g01500 | 1935 | PANTHER | VPRBP PROTEIN-RELATED | 319 | 957 | IPR033270 | GO:0016567 | |
| Cca03g01500 | 1935 | PANTHER | VPRBP PROTEIN-RELATED | 1291 | 1815 | IPR033270 | GO:0016567 | |
| Cca03g01500 | 1935 | PANTHER | VPRBP PROTEIN-RELATED | 991 | 1277 | IPR033270 | GO:0016567 | |
| Cca03g01500 | 1935 | PANTHER | BNAA03G51310D PROTEIN | 1291 | 1815 | - | - | |
| Cca03g01500 | 1935 | PANTHER | BNAA03G51310D PROTEIN | 991 | 1277 | - | - | |
| Cca03g01500 | 1935 | PANTHER | BNAA03G51310D PROTEIN | 13 | 259 | - | - | |
| Cca03g01500 | 1935 | PANTHER | BNAA03G51310D PROTEIN | 319 | 957 | - | - | |
| Cca03g01500 | 1935 | MobiDBLite | consensus disorder prediction | 219 | 246 | - | - |
Showing 1 to 10 of 29 entries
Functional genes information
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Cca03g01500 | K11789 | - | gmx:100796030 | 3063.86 |
Showing 1 to 1 of 1 entries