Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca03g01474 ATGTGGTTGTCAAAGAATCAGTCAGAGAAGAAGGATGGTGTGAATGGATTAGTAGCAGTGGCAATAGATAAAGAAAAAGGAAGCCAAAATGCACTTAAATGGGCCGTTGACAATCTCCTCATCAGAAGTGCAACTGTAATTCTCATCCATGTCAAGCTTCTTGCACCTACTCTATCATCATCACCTTCGCTTTTCGCCCCAAGGATAAGTGCTCTCCTTGGTGATGATAGTTCACAGTTAAACAAAGAACCTGAAGGCCAAAACAAAAATGTTTTCCTTCCATATCGAGTCTTCTGCACACGGAAAGATATTCAATGCAAGGACGTCCTACTAGAAGATGTAGATATATCAAAAGCCTTAATTGAATATGCTGCTCAGGCAGGAATTGAGCATCTGGTTCTTGGCTCCTCAACAAAAACCGGTTTGCTCAAAAGATTCAAGGTGTCGGATATTCCAGGAATAGTTTCGAAAGGGGCACCGGATTTCTGTACAGTCTATGTTATTTCTAAAAGTAAGATTCAATCAATGCGATCGGCTTCTCGTCCTGCTCCGGCCGTTGTCCCTAACGAGACATATCGAGCTAGTGTCAGGTCAGACAATTCAGAACCACATTTGCCAATGGCCAGAAGCATGAGAGAACAAGAAACGCATTTCTTTGATGCTGCACCAGCACCACCGCGTAGATCAAACGATGGAACAGATTCATTCAGGTCACCATTCACTAGGAAAGGTTACACTGGAAGACAATATGGGGACACTGCCAAGCCAGATACTGACATATCCTTTGTAAGCTCTGGAAGGCCAAGCACAGAACGCTTGTTCCCTTCGTTATATAACTCAGATACAGGAATACCCAACCCTCGGCTATCATATAGCTCAGAATCTGATTTAAACTTCAGCTTTGAGTCAATGCAGTATGGAAGGAAGTCTATGGAAATAAGCACTCCTCCTGAATTCTCATCTCTCTCATTTGAGAGTGAGAGGCATTCATCTTCTACATCACAAGCCGTGGATGATATGGAGGCTGAAATGAGAAGATTAAAGTTGGAGCTGAAGCAAACAATGGAAATGTATAACACAGCCTGTAAAGAAGCACTCACAGCACAGCAGAAGgcaGTGGAACTTCAGCAGTGGAAATTAGAGGAAGAGAGGAGATTGGAAGAGGCAAGGCTGGCTGAGGAAGCAGCATTGGCTATTGCAGAAAAGGAGAAAGCCAAGTCTAAAGCAGCCATTGAGGCTGCTGAAGCACAGAAGAGGATAGCAGAACTTGAAGCACAGAAGAGACTCAATGCAGAAATGAAAGCACTTAAAGAATCAGAAGAGAAAAAAAAAGTACTTGATGCTTTGGTAAATGTAGATATCAGGTATAGAAAATACCCAATTGAGGATATTGAAGCTGCAACAAATTTTTTTTCAGCATCCCTCAAAATTGGAGAAGGGGGATATGGTCCAGTTTTTAAGTGCCATTTGGATCACACACCTGTTGCAGTCAAGGTTCTACGCCCTGATGCAGCACAAGGAAGATTACAGTTTAACCGAGAGGTTGAGGTGTTGAGCTGCATACGGCATCCAAACATGGTTCTCCTCCTAGGAGCATGTCCAGAATATGGATGTCTGGTGTATGAGTACATGGCAAATGGAAGCTTAGAAGATTGCCTTTTTCGACGAGGCAACACTCCCCCACTTAGTTGGCAGCTAAGGTTCAAAATAGCAGCTGAAATAGGCACAGGATTGTTGTTCCTGCACCAGACAAAACCAGAACCTCTGGTGCACAGGGACTTAAAACCAGCCAACATATTGCTTGACAGAAACTATGTGGCCAAGATCAGCGATGTAGGTCTGGCCAGGCTAGTTCCACCATCTGTGGCGGACACCGTGACGCAGTATCGCATGACATCGACGGCAGGAACCTTCTGCTACATAGATCCTGAGTACCAGCAGACAGGTATGCTAGGAGTAAAGTCAGACATATACTCCCTTGGCATCATTTTTTTGCAAATTTTGACAGCAAAGGCACCAATGGGTTTGACCCATCAAGTTCAAAAGGCCATTGAGAAGGGAACTTTTGGTGACATGTTGGATCCATCACTCACTGACTGGCCTGTGGACGAGGCCTTGAAGTTGGCTAAGTTGGGAGTGCAGTGTGCCGAGTTAAGGCGCAAAGACAGACCTGATCTTGCCAAGGTTATCCTACCAGAACTCAACAGGCTAAGAAACCTTGCTGAAGATGACAATCTTCTTTCAGTTTTGGGTGACAAAAAAACTGTCAAGCATGAGAGACAAGTTTCTGTGCAGTTGGATGGAGGGTGCCCTCCATTTCATCACTCAGGCGCAGACTCGTCAGTCAATTACTGGACAACATCCAGTTGA 2370 0.4439 MWLSKNQSEKKDGVNGLVAVAIDKEKGSQNALKWAVDNLLIRSATVILIHVKLLAPTLSSSPSLFAPRISALLGDDSSQLNKEPEGQNKNVFLPYRVFCTRKDIQCKDVLLEDVDISKALIEYAAQAGIEHLVLGSSTKTGLLKRFKVSDIPGIVSKGAPDFCTVYVISKSKIQSMRSASRPAPAVVPNETYRASVRSDNSEPHLPMARSMREQETHFFDAAPAPPRRSNDGTDSFRSPFTRKGYTGRQYGDTAKPDTDISFVSSGRPSTERLFPSLYNSDTGIPNPRLSYSSESDLNFSFESMQYGRKSMEISTPPEFSSLSFESERHSSSTSQAVDDMEAEMRRLKLELKQTMEMYNTACKEALTAQQKAVELQQWKLEEERRLEEARLAEEAALAIAEKEKAKSKAAIEAAEAQKRIAELEAQKRLNAEMKALKESEEKKKVLDALVNVDIRYRKYPIEDIEAATNFFSASLKIGEGGYGPVFKCHLDHTPVAVKVLRPDAAQGRLQFNREVEVLSCIRHPNMVLLLGACPEYGCLVYEYMANGSLEDCLFRRGNTPPLSWQLRFKIAAEIGTGLLFLHQTKPEPLVHRDLKPANILLDRNYVAKISDVGLARLVPPSVADTVTQYRMTSTAGTFCYIDPEYQQTGMLGVKSDIYSLGIIFLQILTAKAPMGLTHQVQKAIEKGTFGDMLDPSLTDWPVDEALKLAKLGVQCAELRRKDRPDLAKVILPELNRLRNLAEDDNLLSVLGDKKTVKHERQVSVQLDGGCPPFHHSGADSSVNYWTTSS 789
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca03g01474 789 Gene3D HUPs 18 157 IPR014729 -
Cca03g01474 789 ProSiteProfiles Protein kinase domain profile. 471 734 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cca03g01474 789 Coils Coil 383 443 - -
Cca03g01474 789 MobiDBLite consensus disorder prediction 219 267 - -
Cca03g01474 789 ProSitePatterns Serine/Threonine protein kinases active-site signature. 589 601 IPR008271 GO:0004672|GO:0006468
Cca03g01474 789 Coils Coil 330 357 - -
Cca03g01474 789 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 18 146 - -
Cca03g01474 789 Pfam Universal stress protein family 18 145 IPR006016 -
Cca03g01474 789 SMART serkin_6 471 734 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cca03g01474 789 Gene3D Transferase(Phosphotransferase) domain 1 544 755 - -
Cca03g01474 789 PANTHER OS02G0152300 PROTEIN 5 776 - -
Cca03g01474 789 SUPERFAMILY Protein kinase-like (PK-like) 454 730 IPR011009 -
Cca03g01474 789 PANTHER UNIVERSAL STRESS FAMILY PROTEIN 5 776 - -
Cca03g01474 789 CDD STK_N 17 170 - -
Cca03g01474 789 Pfam Protein kinase domain 475 725 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cca03g01474 789 Gene3D Phosphorylase Kinase; domain 1 450 543 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca03g01474 Cca-Chr3 33206556 33211692 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca03g01474 1 764 Receptor kinase-like Gene Family AT1G78940 56.688 0.0 798
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-IXb Cca03g01474 Pkinase 3.1e-39 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca03g01474 - - gmx:100803461 1177.16
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca03g01474 03 33206556 33211692 Cca03g01474 03 33206556 33211692 ECH