Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca03g01464 ATGGATCCTCCAAAGAAACCTAACAAGATCAGGGAAATCGTGAGACTTCAACAGATCCTCAAGAAATGGAGAAGGGTAGCCAACTCTTCAAAATCAagcagaagtagcaacaacaacaacaacaccaccaccaccacaagcagaagcatcaacTTTCTTAAAAGAACACTTTCTATATCAGAACGTGAATCAGCATCAAGCAATGTTGTTCCAAAGGGCTACGTAGCTGTTTGTGTTGGCTTGGACCTTAACAGGTTCGTTATACCAACCGAGTATTTAGGTCACCAAGCCTTTCACATGTTGCTCAGAGAAGCTGAGGAAGAATTTGGGTTTGAACAAACCGGGGTTCTCAGGATTCCTTGTGAAGTATCAGTGTTCGAGAGTATCTTGAAGATAGTGGAGAGAAAGGACAGGTTTTTCACACAGAAATGCAGGTTTAGCATTGAGAAGATGATGGGGTATTGTTCCTCCAATAACCACCTTGATTATTCTTCTCATCGTCCTCAAAGTCCAATGTGCAGATAG 525 0.3714 MDPPKKPNKIREIVRLQQILKKWRRVANSSKSSRSSNNNNNTTTTTSRSINFLKRTLSISERESASSNVVPKGYVAVCVGLDLNRFVIPTEYLGHQAFHMLLREAEEEFGFEQTGVLRIPCEVSVFESILKIVERKDRFFTQKCRFSIEKMMGYCSSNNHLDYSSHRPQSPMCR 174
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca03g01464 174 PANTHER OSJNBA0060N03.10 PROTEIN 6 174 - -
Cca03g01464 174 MobiDBLite consensus disorder prediction 24 47 - -
Cca03g01464 174 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 6 174 IPR003676 GO:0009733
Cca03g01464 174 Pfam Auxin responsive protein 22 132 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca03g01464 Cca-Chr3 33133591 33134461 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca03g01464 5 174 Calmodulin-binding Proteins AT2G24400 54.444 1.34e-58 179
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca03g01464 03 33133591 33134461 Cca03g01464 03 33133591 33134461 ECH