Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca03g01462 ATGGCCACCGCCGACTCCGATCTGGATTACGACTTCCCCTCTCTCGATTACGACCTTCGCTTTCTCAGCCTCGCCGGAACCGACGTCTTCTCCGCCTTCCAAAGCCTCTTACCGGATGCGATGACTTCATTTTCAACTTGTGAACTAGCAGACCCTCTTTGTTCCCAAAACCTCACTCCCAAGCATTCCACCATCACAGCTACCATTGATACTCAGTCATCGATTTGTGGCACTGCTAACGTTGGCAGCCCCGTATCAGCTAATAAACCAGAGGGCAGAGAGAATCATACTAAAGGAGCAACAAGTGGTCCCTCTGAGCCGTCTGACGAGGATGATGAAGCAGGTATTTGTGAACAGAGCACAAATCCACTTGAAGTGAAGCGCCTTAAAAGGATGGATTCTAACCGCGAGTCTGCCAGAAGGTCAAGAAGAAGAAAACAAGCGCATTTGGCTGACCTTGAGTTGCAGGTTGAAAAACTGAAAGTGGAAAATGCAACCCTATACAAGCAGTTCACTGATGCTAGTCAACAATTTCGTGAGGCTGATACGAATAACCGGGTGCTCAAATCAGATGTAGAAGCTTTGAGAGCCAAGGTGAAGTTAGCTGAGGATATGGTGACTCGGAGCTCTTTTACCACCTTAAACACTCAACTTCTTCAGACACAGTGTCAATTGAGCACACCCCAGCAACTGAACACAACTAATCTGCGGCGCATGGCTCACGTTTCTCCAAGCATCACCGTTCATGGAAATGATGGTTCATACAATGGTGTCACAGTTGGTGGACAGAATTCAGGTATTGGAAACTTGGACATGGCTTACAACGATGTCAACAATGGAGTCGAGCTGTGGGACTATTCGGCCACTTGA 870 0.4782 MATADSDLDYDFPSLDYDLRFLSLAGTDVFSAFQSLLPDAMTSFSTCELADPLCSQNLTPKHSTITATIDTQSSICGTANVGSPVSANKPEGRENHTKGATSGPSEPSDEDDEAGICEQSTNPLEVKRLKRMDSNRESARRSRRRKQAHLADLELQVEKLKVENATLYKQFTDASQQFREADTNNRVLKSDVEALRAKVKLAEDMVTRSSFTTLNTQLLQTQCQLSTPQQLNTTNLRRMAHVSPSITVHGNDGSYNGVTVGGQNSGIGNLDMAYNDVNNGVELWDYSAT 289
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca03g01462 289 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 130 145 IPR004827 GO:0003700|GO:0006355
Cca03g01462 289 PANTHER BASIC LEUCINE ZIPPER 63 1 281 - -
Cca03g01462 289 SMART brlzneu 123 187 IPR004827 GO:0003700|GO:0006355
Cca03g01462 289 Coils Coil 136 170 - -
Cca03g01462 289 MobiDBLite consensus disorder prediction 81 122 - -
Cca03g01462 289 Gene3D - 126 183 - -
Cca03g01462 289 SUPERFAMILY Leucine zipper domain 127 177 IPR046347 GO:0003700|GO:0006355
Cca03g01462 289 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 125 188 IPR004827 GO:0003700|GO:0006355
Cca03g01462 289 Coils Coil 185 205 - -
Cca03g01462 289 PANTHER BZIP TRANSCRIPTION FACTOR 1 281 - -
Cca03g01462 289 Pfam bZIP transcription factor 125 171 IPR004827 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca03g01462 Cca-Chr3 33094875 33099242 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca03g01462 39 270 bZIP Transcription Factor Family AT5G24800 51.261 1.35e-64 202
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Cca03g01462 bZIP_1 2e-12 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca03g01462 K25784 - gmx:780555 421.009
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca03g01462 03 33094875 33099242 Cca03g01462 03 33094875 33099242 ECH