Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca03g01428 ATGAAAACCCACCATCATCATCAACCAAAACTGAAAACCCAACTCTTCTCATGCGGTTTCTTCCGTCACTGCGCCCAAACCGTCCTCAGCCCCACCGGCGccacccctcccctccctctcacccctcctcgcttccAATGCGAATCCTCCACCTCTTCCTCTTCCTCCCAAAGCTTCACTCAATGGAGATTCTCTCCcaccaacaccaacaccaacaccaacataaacacaaacacaaacacaaacaacctcgtcaaaacaaacacaaccacaaccacaaccactaccactcttcctccaccaccaCAAATCCTTAACCTCCAAGAACTCTTCCACATTTCAGAGCTCCAACTAACCACCGACCCCACCACCGCCCTCCACCTTCTAGAACGTTCCCTCGTTCCCAACCCTCCCCAAGACCAACCCCCCTGCCCCACCAACCTCATGCGCGCCCTCATCCGCAACCTCCCCCTCGCCACCAAGATCCTCTTCGCCCTCTGCCTCTCCCATGTCAACCGTCGTGTCGCCGTCGAGACTGGTGCGGTCTCTGCGATCGTAGAGATCGCACCAGAGCTCGACGGCGCACCAGTTGAGCGCGCTCTCGCCGCGCTCGAACTCATGTGCACCCTACCCGAGGGCGCCGAAGAAGTGAGAGCCCATGCCCTCGCCGTGCCCGTCATGGTCACCATGATGGGCAAGACTGGCGCCCGCGGGAAGGAGTACGCCATCGGCGTGCTCGCTGTGGTCTACGGCGGCGCCGGGGCAGAGTTGCAGACAGCGCCGCCGGAAGAGGTGGCGCGTGCGGTGGAGCTCGCGCTGCAAGGAGAGTGCAGCGCGAGAGGAAGGAGGAAAGGAGCACAGTTGTTGAAGACATTGCAACAGCTCTCTCAGCCTGAAATTGAAGCTGAACCTCACACTCATGCTGCTAATTGA 933 0.5059 MKTHHHHQPKLKTQLFSCGFFRHCAQTVLSPTGATPPLPLTPPRFQCESSTSSSSSQSFTQWRFSPTNTNTNTNINTNTNTNNLVKTNTTTTTTTTTLPPPPQILNLQELFHISELQLTTDPTTALHLLERSLVPNPPQDQPPCPTNLMRALIRNLPLATKILFALCLSHVNRRVAVETGAVSAIVEIAPELDGAPVERALAALELMCTLPEGAEEVRAHALAVPVMVTMMGKTGARGKEYAIGVLAVVYGGAGAELQTAPPEEVARAVELALQGECSARGRRKGAQLLKTLQQLSQPEIEAEPHTHAAN 310
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca03g01428 310 SUPERFAMILY ARM repeat 144 249 IPR016024 -
Cca03g01428 310 PANTHER ARM REPEAT SUPERFAMILY PROTEIN 1 302 - -
Cca03g01428 310 Gene3D - 125 309 IPR011989 -
Cca03g01428 310 MobiDBLite consensus disorder prediction 66 85 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca03g01428 154 310 U-box Gene Family AT1G49780 33.544 1.63e-17 80.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca03g01428 - - gmx:100814020 397.512
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca03g01428 03 32668810 32670287 Cca03g01428 03 32668810 32670287 ECH