Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca03g01414 ATGGCATCATCCTTGATGTTACCATCTGCTTCAATGCTGAGACCATGTAACACTTTATCATCATCATGTACTTCATCACGAAGACTTGCTGTCTTTCACCTTGTTTCCACTGGTGGCATTGCTCTCCCACAATCCAAGTTATTTGGTGCAAAAGGATCAGAGTTGTTAAGAGTAGCAGAGGCTACTGCTGCAGAAAAACCAGCACAACCGGAGAAAAATTTGTTTGACTGGGTCAAAAATGACAACAGAAGATTTCTCCATGTTGTGTACCGTGTTGGAGACTTGGACAAGACTATAAAGTTCTACACTGAATGCCTTGGCATGAAGCTATTGAGGAAACGGGATATACCTGAAGACAGATATTCTAATGCTTTTCTTGGATATGGTCCTGAAGACTCCAATTTTACTGTTGAACTTACTTACAATTATGGAGTGGATAACTATGAGATTGGAAGTGGCTTTGGTCATTTTGGTGTTGCAGTTGAAGATATTTACAAGAGAGTAGACCTAATAAAGGCAAAAGGAGGAAAGATTACAAAGGAGCCAGGGCCAGTTAAAGATGGAAGTACAGTAATTGCATTCATTGAAGATCCGGATGGTTATAAGTTTGAACTTTTGGAGAGAAGACCTACTTCTGAACCCCTATGCCAAGTGATGCTTCGAGTAGGCGATCTTGATCGTGCCATAGCCTTCTATCAAAAATATACAGTAGCCTTTATGGGCTATGGTCCTGAAGATAAGAATACTGTTCTAGAACTGACATATAACTATGGCATCACTAATTATGACAAAGGAAATGGTTATGCTCAGATTGCCATAGGCACAAATGATGTCTATAAGACTGCAGAGGCAATCAAATTATGTGGAGGGAAGATTATCCGTGAACCTGGGCCCTTGCCAGGTATCAACACCAAGATTGTGGCTTGCTTGGACCCTGATGGTTGGAAATTAGCATTTGTTGATAATGTTGATTTTCTGAAGGAATTGGAGTGA 993 0.4048 MASSLMLPSASMLRPCNTLSSSCTSSRRLAVFHLVSTGGIALPQSKLFGAKGSELLRVAEATAAEKPAQPEKNLFDWVKNDNRRFLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYSNAFLGYGPEDSNFTVELTYNYGVDNYEIGSGFGHFGVAVEDIYKRVDLIKAKGGKITKEPGPVKDGSTVIAFIEDPDGYKFELLERRPTSEPLCQVMLRVGDLDRAIAFYQKYTVAFMGYGPEDKNTVLELTYNYGITNYDKGNGYAQIAIGTNDVYKTAEAIKLCGGKIIREPGPLPGINTKIVACLDPDGWKLAFVDNVDFLKELE 330
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca03g01414 330 Gene3D - 57 210 IPR029068 -
Cca03g01414 330 Gene3D - 211 330 IPR029068 -
Cca03g01414 330 PANTHER LACTOYLGLUTATHIONE LYASE 16 330 - -
Cca03g01414 330 ProSiteProfiles Vicinal oxygen chelate (VOC) domain profile. 84 208 IPR037523 -
Cca03g01414 330 ProSiteProfiles Vicinal oxygen chelate (VOC) domain profile. 214 322 IPR037523 -
Cca03g01414 330 ProSitePatterns Glyoxalase I signature 1. 87 108 IPR018146 GO:0004462|GO:0046872
Cca03g01414 330 TIGRFAM glyox_I: lactoylglutathione lyase 73 217 IPR004361 GO:0004462|GO:0046872
Cca03g01414 330 Pfam Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 217 319 IPR004360 -
Cca03g01414 330 Pfam Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 85 205 IPR004360 -
Cca03g01414 330 SUPERFAMILY Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase 83 234 IPR029068 -
Cca03g01414 330 CDD GlxI_Ni 86 206 - -
Cca03g01414 330 PANTHER LACTOYLGLUTATHIONE LYASE 16 330 - -
Cca03g01414 330 SUPERFAMILY Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase 215 322 IPR029068 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca03g01414 Cca-Chr3 32498040 32506585 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca03g01414 87 207 Calmodulin-binding Proteins AT1G08110 32.432 3.07e-16 75.1
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca03g01414 03 32498040 32506585 Cca03g01414 03 32498040 32506585 ECH