Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca03g01362 ATGAACCACCCCTTCACCACCCTCTTCGCTACTATAGTAACCATACTCATTGTTTCCACCACCACCGTCTCACAAGCTATCACCACCAACAATCAGACACACTTTTTCTCTCTCATCAAGGACTCTCTCACGGGAAAATACCCTCTGAACTGGGATGAAGCCAAAGCAGTGTGCGACTTCACCGGGGTTACCTGCAACACCGAGGGTGACGTTATCAACCTCGACCTTTCAGGTTGGTCATCACTCTCCGGAAAGTTCCCTTCAGAAACATGCTCCTACCTCCCACAACTACGTGTTCTACGCCTCGGCCACACCAGGTTCAAGTTCCCCATAGACACCATCCTCAACTGTTCCCACTTGCAAGAGCTTAACATGAACCACATGTACCAAACCGGCACACTCCCAGATTTCTCTTCCTTAAAGTCTCTTAAAATTCTCGACTTGTCCTATAATCTCTTCACAGGCCAGTTCCCCATGTCGGTGTTCAACCTCACCAACCTCGAGGTGCTTAACTTCAACGAAAACGGAGGCTTCAACCTGTGGAAGTTACCAAATGATATAGACAAACTCAGAAACCTCAAGTCCGTGGTGCTCACAACGTGCATGGTGCATGGCCAAATCCCTGCGTCCATAGGGAACATAACTTCCCTCATAGATCTCGAACTCAGTGGGAACTTTCTCACGGGACAAATTCCGAAGGAGCTTGGACAACTGAAGAACCTGCAACAGCTTGAGCTTTACTACAACTACCACCTCGTTGGGAACATTCCAGAAGAGTTGGGGAACCTCACGGAGCTCGTGGATTTGGACATGTCAGTGAACAAGTTCACTGGGAGCATCCCTGCCTCGGTGTGTAGGCTTCCCAAGCTTCAAGTCTTGCAACTCTACAACAACAGCCTCAGTGGTGAAATCCCAGGTGCGATTGAAAACTCAACAGCTTTGAGAATGTTGTCTCTCTACGACAACAACCTTATAGGACATGTTCCCACGAAATTGGGACAGTTCTCGAGGATGTTGGTTCTTGACTTGTCGGAGAACCGTTTATCTGGTCCCTTGCCAACCGAGGTTTGCAAGGGTGGTACGCTAGAGTACTTTCTCGTTCTTGATAACATGTTTTCTGGTGAGATACCACAAAGTTACGCCAACTGCATGATGCTGTTGAGGTTTAGAGTTAGTAACAACCGTTTGGAGGGCTCCATTCCCGAGGGGCTCCTTAGTTTGCCACACGTTTCTATCATTGACTTGAGTAGCAATAATTTGACCGGTCCAGTTCCTGAGATTAGCGGAAATTCTAGAAACTTATCTGAACTGTTCCTCCAGGGGAACAAGATTTCAGGTGTCATAACTCCCACTATCTCCCGAGCTATTAACCTAGTCAAGATTGATTTCAGTTACAACCTTCTGTCTGGTCCAATTCCTTCTGAAATTGGCAAGCTGAGAAGGCTTAATTTGCTTATGTTGCAAGGGAACAAGTTGAGTTCTTCCATCCCAAGTTCACTCTCCTCGTTGGAGTCTCTCAACCTTCTTGATCTCTCCAATAATCTTTTAACTGGGGGCATCCCTGAAAGCCTCTCTGTGCTGCTACCAAACTCTATTAACTTCTCTCACAACCTTCTCTCGGGTCCTATTCCTCCCAAACTGATCAAAGGAGGTTTGGTGGAAAGCTTTTCAGGGAATCCTGGTTTGTGTGTGTTGCCTGTGTATGCTAATTCATCGGATCAAAACTTTCCCATATGTGCAAGTGCCTACAAGAGTAAGAGGATAAACACCATATGGATTGCTGGGGTGTCAGTGGTTTTGATTTTTATTGGCTCTGCCTTTTTTCTCAAACGAAGGTGCGGCAAAGACACGGCTATAGTGGAACATGAGGACACGCTGTCTTCGTCGTTCTTCTCTTATGATGTTAAGAGCTTCCATAAGATCTCTTTTGACCAAAGGGAGATTCTGGAGTCCTTGGTGGATAAGAACATTATGGGGCATGGAGGGTCTGGGACAGTCTACAAGATTGAGTTGAAAAGTGGTGATATAGTTGCAGTGAAGAGGCTGTGGAGTCGCAAGTCCAAGGATTCAGCTCCTGAGGATCGGTTATTTCTGGACAAGGCGTTGAAAGCAGAGGTGGAGACATTAGGCAGCATAAGACACAAGAACATAGTGAAACTCTACTGCTGCTTCTCCAGTTTGGATTGCagtttgttggtttatgagtacatgccaaatggtaatctttgggattccctgcacaaaggttggatccttttggattggcctactcgttatagaattgcactggggattgcacagggtttggcatacctccaccatgatttgcttctccctattatccatcgagacattaagtcaactaatatcctgttggatgttgattaccagcctaaggttgcagactttgggattgccaaggttttgCAAGCAAGAGGAGGCAAGGATTCCACAACAACTGTTATTGCAGGAACATATGGTTACTTAGCTCCAGAATTTGCATATTCATCAAGGGCCACCATCAAGTGCGATGTCTACAGTTTTGGGGTGATTTTGATGGAACTGTTAACTGGGAAGAAGCCTGTGGAGGCAGAATTTGGAGAGAACAGAAATATTGTTTTTTGGGTTTCCAACAAAGTAGAAGGCAAGGAAGGGGCTAGACCAAGTGAAGTGTTTGACCCAAGATTATCATGTTCATTCAAGGATGATATGATCAAAGTGTTAAGGATTGCCATTCGCTGCACCTACAAAGCCCCAGCAAGTAGACCAACCATGAAAGAGGTTGTTCAGCTTCTGATTGAGGCAGAGCCACGCGATTCGGATTCTTGCAAGTTGTCTACCAAAGATGTATCAAATGTCACCGTATTAAAGAAACCATATGAATTATAA 2889 0.4199 MNHPFTTLFATIVTILIVSTTTVSQAITTNNQTHFFSLIKDSLTGKYPLNWDEAKAVCDFTGVTCNTEGDVINLDLSGWSSLSGKFPSETCSYLPQLRVLRLGHTRFKFPIDTILNCSHLQELNMNHMYQTGTLPDFSSLKSLKILDLSYNLFTGQFPMSVFNLTNLEVLNFNENGGFNLWKLPNDIDKLRNLKSVVLTTCMVHGQIPASIGNITSLIDLELSGNFLTGQIPKELGQLKNLQQLELYYNYHLVGNIPEELGNLTELVDLDMSVNKFTGSIPASVCRLPKLQVLQLYNNSLSGEIPGAIENSTALRMLSLYDNNLIGHVPTKLGQFSRMLVLDLSENRLSGPLPTEVCKGGTLEYFLVLDNMFSGEIPQSYANCMMLLRFRVSNNRLEGSIPEGLLSLPHVSIIDLSSNNLTGPVPEISGNSRNLSELFLQGNKISGVITPTISRAINLVKIDFSYNLLSGPIPSEIGKLRRLNLLMLQGNKLSSSIPSSLSSLESLNLLDLSNNLLTGGIPESLSVLLPNSINFSHNLLSGPIPPKLIKGGLVESFSGNPGLCVLPVYANSSDQNFPICASAYKSKRINTIWIAGVSVVLIFIGSAFFLKRRCGKDTAIVEHEDTLSSSFFSYDVKSFHKISFDQREILESLVDKNIMGHGGSGTVYKIELKSGDIVAVKRLWSRKSKDSAPEDRLFLDKALKAEVETLGSIRHKNIVKLYCCFSSLDCSLLVYEYMPNGNLWDSLHKGWILLDWPTRYRIALGIAQGLAYLHHDLLLPIIHRDIKSTNILLDVDYQPKVADFGIAKVLQARGGKDSTTTVIAGTYGYLAPEFAYSSRATIKCDVYSFGVILMELLTGKKPVEAEFGENRNIVFWVSNKVEGKEGARPSEVFDPRLSCSFKDDMIKVLRIAIRCTYKAPASRPTMKEVVQLLIEAEPRDSDSCKLSTKDVSNVTVLKKPYEL 962
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca03g01362 962 Pfam Protein kinase domain 654 930 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cca03g01362 962 Gene3D Ribonuclease Inhibitor 285 574 IPR032675 -
Cca03g01362 962 Gene3D Phosphorylase Kinase; domain 1 635 736 - -
Cca03g01362 962 SMART serkin_6 652 932 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cca03g01362 962 SUPERFAMILY Protein kinase-like (PK-like) 638 932 IPR011009 -
Cca03g01362 962 Gene3D Transferase(Phosphotransferase) domain 1 737 956 - -
Cca03g01362 962 ProSitePatterns Serine/Threonine protein kinases active-site signature. 780 792 IPR008271 GO:0004672|GO:0006468
Cca03g01362 962 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE FAMILY PROTEIN-RELATED 8 943 - -
Cca03g01362 962 PANTHER RECEPTOR PROTEIN-TYROSINE KINASE CEPR1 8 943 - -
Cca03g01362 962 ProSiteProfiles Protein kinase domain profile. 652 933 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cca03g01362 962 SUPERFAMILY L domain-like 72 353 - -
Cca03g01362 962 Gene3D Ribonuclease Inhibitor 37 178 IPR032675 -
Cca03g01362 962 SUPERFAMILY RNI-like 249 575 - -
Cca03g01362 962 Gene3D Ribonuclease Inhibitor 179 283 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca03g01362 Cca-Chr3 31736637 31740364 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca03g01362 27 938 Receptor kinase-like Gene Family AT5G49660 65.397 0.0 1218
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Cca03g01362 Pkinase 1.4e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca03g01362 - - gmx:100785822 1685.23
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca03g01362 03 31736637 31740364 Cca03g01362 03 31736637 31740364 ECH