Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cca03g01361 | ATGTTCGCCGCCTTGCGTCTCCTTCTTCTTCTCTCACTCTTCTCACCACTCACCAATGCCCAAACCAACGACGAGCGTGAAATTCTTCTCACCCTAAAATCCTCCCTCGGGAAATCAAATCCCAAACTCTTGGACACGTGGAATGCCACCAATTCAGTATGCACCTTCGGCGGCGTCACCTGCAACTCCCTCCTTTCGGTCACCGAAATCGACCTCTCCAACCAGTCCCTCTCCGGGGTTCTCCCCTTCCACTCGCTCTGCAACCTTCCATCGCTCCAAAAACTGGCCTTGGGCTTCAACAACTTAAACGGCAACGTTTCAGAGGATTTAAGAAACTGCGTCAAGTTACGCTACTTGGACTTGGGAAACAACCTTTTCTCGGGTCCCTTTCCTGACATATCTCCGCTCAACCAACTGCAGCATCTTTTCCTAAACAAAAGTGGATTTTCGGGGACTTTCCCGTGGCAGTCGCTGTTAAACATGACGGATTCTCTGTTACAGTTAAGCGTCGGAGACAACCCTCTGGACTTCACGCCGTTTCCCAAAGAGGTTGTGAGTCTCAAGAATTTGAATTGGCTCTACCTATCCAACTGCACCCTCGGAGGGAAACTTCCGGTGGGACTCGGCAACCTCACGGAGCTAACGGAATTGGAATTCTCCGATAATTTCATCACCGGCGACTTCCCCGCGGAGATTGTCAACCTTCGCAAGCTCTGGCAGCTTGAATTCTTCAATAACTCCTTCACTGGAAAGATTCCAACTGGCTTGAGAAACCTCACCAGACTTGAGAATTTGGACGGGTCAATGAATAAGCTCGAAGGGGATCTCTCTGAGTTGAAGTACTTAACCAATATAGTTTCCTTGCAATTCTTCGAGAACAACTTGTCGGGGCAGATTCCTATTGAGATAGGCGAGTTCAAACGCCTCACGGCTTTTTCTCTGTACAGGAACAGGTTAACGGGTCCTATTCCTCAGAAAATTGGTTCCTGGTCGGAGTTTGACTACATCGACGTGTCGGAGAATTTTCTGACAGGGAGGATCCCGCCGGAGATGTGCAAAAGGGGGAAGATGTCCGCGCTGCTCGTCCTTCAGAACAACCTCTCCGGTGAGATTCCGGCCACCTACGGAGACTGTTTGAGTCTGAAGCGATTCAGAGTGAGCAACAACTCGCTCTCGGGAACCGTGCCTCCAACGGTTTGGGGATTGCCAAACGCGGAAATAATCGATATCGAGCTGAATCAGTTGGAAGGTTCGATCACTTGGGATATCAAAAACGCGAAAACGCTGGCAACAATATTCGGCCGGAAGAACCGGTTGGCCGGTGAATTACCTGAAGAAATCTCAAAAGCGACATCGTTAGTGAGTGTGGATTTAAGCGAGAATCAAATTTCGGGGAAGATTCCAGAAGGGATAGGCGAGCTTAAAGAACTAGGTAGCCTTCATTTACAGAGCAATAAATTAACAGGTTCGATACCGGAATCTCTAGGTTCCTGTAAATCACTAAACGACATTGACCTGTCGAGGAATTCACTCTCTGGTAAAATCCCCTCCTCGTTGGGTTCTTTCCCCGCTCTGAATTCTCTCAACCTCTCAGAGAATCTTCTCTCAGGCGAAATCCCGGCAAGTTTAGCGTACCTCAGGTTAAGCCTCTTTGATTTATCCAACAACCGGTTAACCGGTCCAATTCCGCAGGCTCTAACACTAGAAGCTTACAACGGAAGCCTCTCTGGAAACCCTAATTTATGCAGCGTGGACGCAATTAGCTACTTCAAACGTTGCTCTGCTTCCTCAGGCATGTCCAAGGACATGCGCGCACTCCTCATTTGCTTCGCTGTAGCGTTGATGCTGTTGCTCTCTTGTCTCGCAGTTTACTTACAGTTAAAGAGGAGAAGAGAGGAGGGTGAGAAAAGATACGGGGAACGTTCTCTGAAGGAGGAATCATGGGACGTGAAATCGTTCCACGTGTTGAGTTTCTCCGAAGGGGAGATTCTAGATTCCATCAAGCAGGAGAATCTGATAGGTTCGGGAGGCTCGGGGAACGTGTACAGAGTCACGCTTTCCAATGGAAAAGAACTCGCAGTGAAGCATATCTGGAACAGCGACTTCCCCGCGAGGAGAAAATCGTGGAGCAGCACTCCCATGCTGAAGCGTGGCAAGTTGAAGGAGTTCGACGCCGAGGTGCAGGCATTGAGCTCCATTAGGCACGTGAATGTTGTGAAGCTCTATTGCAGCATAACAAGCGAGGATTCGAGTTTGTTGGTGTACGAGTATTTGCCCAATGGAAGCTTGTGGGACCGGCTTCACACCAGTCGGAAAATGGAACTTGATTGGGAAACACGATACGAAATTGCGGTCGGTGCAGCCAAAGGGTTGGAGTATTTGCATCATGGGTGTGAAAGGCCAGTTATTCATAGGGATGTCAAATCGAGTAACATATTGTTGGACGAGTTTCTCAAACCTAGGATTGCGGATTTCGGTCTTGCTAAGGTTGTTCAATCCAACGTTGGGAAAGATTCTTCTAGTCATGTCATTGCTGGAACTCACGGCTACATAGCTCCTGAATATGGATACACATACAAGGTGAATGAGAAGAGTGATGTCTATAGTTTTGGAGTGGTGTTGATGGAGTTGGTGACTGGGAAGAGGCCAATGGAACCGGAATTTGGGGAAAATAAGGATATAGTGAGTTGGGTGCATAACAAGGCACGGAGCAAAGAGGGGCTTAGGAGTGTCGTAGATTCGAGAATTCCGGAGATGTATAAAGAGGAAGCTTGCAAGGTGTTGAGAACTGCAGTTTTGTGCACGGGGACTCTTCCAGCTTTGAGACCCACCATGAGAGCAGTGGTTCAAAAACTTGAGGATGCTGAGCCTTGTAAATTGGTTGGGATTGTTATTAGCAGTGAAAAGAAAAGTGGGGTCAACGACAAATAA | 2931 | 0.4828 | MFAALRLLLLLSLFSPLTNAQTNDEREILLTLKSSLGKSNPKLLDTWNATNSVCTFGGVTCNSLLSVTEIDLSNQSLSGVLPFHSLCNLPSLQKLALGFNNLNGNVSEDLRNCVKLRYLDLGNNLFSGPFPDISPLNQLQHLFLNKSGFSGTFPWQSLLNMTDSLLQLSVGDNPLDFTPFPKEVVSLKNLNWLYLSNCTLGGKLPVGLGNLTELTELEFSDNFITGDFPAEIVNLRKLWQLEFFNNSFTGKIPTGLRNLTRLENLDGSMNKLEGDLSELKYLTNIVSLQFFENNLSGQIPIEIGEFKRLTAFSLYRNRLTGPIPQKIGSWSEFDYIDVSENFLTGRIPPEMCKRGKMSALLVLQNNLSGEIPATYGDCLSLKRFRVSNNSLSGTVPPTVWGLPNAEIIDIELNQLEGSITWDIKNAKTLATIFGRKNRLAGELPEEISKATSLVSVDLSENQISGKIPEGIGELKELGSLHLQSNKLTGSIPESLGSCKSLNDIDLSRNSLSGKIPSSLGSFPALNSLNLSENLLSGEIPASLAYLRLSLFDLSNNRLTGPIPQALTLEAYNGSLSGNPNLCSVDAISYFKRCSASSGMSKDMRALLICFAVALMLLLSCLAVYLQLKRRREEGEKRYGERSLKEESWDVKSFHVLSFSEGEILDSIKQENLIGSGGSGNVYRVTLSNGKELAVKHIWNSDFPARRKSWSSTPMLKRGKLKEFDAEVQALSSIRHVNVVKLYCSITSEDSSLLVYEYLPNGSLWDRLHTSRKMELDWETRYEIAVGAAKGLEYLHHGCERPVIHRDVKSSNILLDEFLKPRIADFGLAKVVQSNVGKDSSSHVIAGTHGYIAPEYGYTYKVNEKSDVYSFGVVLMELVTGKRPMEPEFGENKDIVSWVHNKARSKEGLRSVVDSRIPEMYKEEACKVLRTAVLCTGTLPALRPTMRAVVQKLEDAEPCKLVGIVISSEKKSGVNDK | 976 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cca03g01361 | 976 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 802 | 814 | IPR008271 | GO:0004672|GO:0006468 | |
Cca03g01361 | 976 | SUPERFAMILY | L domain-like | 270 | 591 | - | - | |
Cca03g01361 | 976 | SUPERFAMILY | L domain-like | 57 | 327 | - | - | |
Cca03g01361 | 976 | Pfam | Leucine rich repeat | 476 | 535 | IPR001611 | GO:0005515 | |
Cca03g01361 | 976 | Gene3D | Transferase(Phosphotransferase) domain 1 | 758 | 961 | - | - | |
Cca03g01361 | 976 | Pfam | Protein kinase domain | 669 | 950 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Cca03g01361 | 976 | ProSiteProfiles | Protein kinase domain profile. | 667 | 959 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Cca03g01361 | 976 | Gene3D | Ribonuclease Inhibitor | 134 | 358 | IPR032675 | - | |
Cca03g01361 | 976 | PANTHER | RECEPTOR-LIKE PROTEIN KINASE 7 | 5 | 964 | - | - | |
Cca03g01361 | 976 | Gene3D | Ribonuclease Inhibitor | 23 | 133 | IPR032675 | - | |
Cca03g01361 | 976 | Gene3D | Phosphorylase Kinase; domain 1 | 650 | 757 | - | - | |
Cca03g01361 | 976 | Pfam | Leucine rich repeat N-terminal domain | 23 | 62 | IPR013210 | - | |
Cca03g01361 | 976 | ProSitePatterns | Protein kinases ATP-binding region signature. | 673 | 695 | IPR017441 | GO:0005524 | |
Cca03g01361 | 976 | SMART | serkin_6 | 667 | 959 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Cca03g01361 | 976 | SUPERFAMILY | Protein kinase-like (PK-like) | 658 | 952 | IPR011009 | - | |
Cca03g01361 | 976 | Gene3D | Ribonuclease Inhibitor | 359 | 591 | IPR032675 | - | |
Cca03g01361 | 976 | PANTHER | LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE FAMILY PROTEIN-RELATED | 5 | 964 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Cca03g01361 | Cca-Chr3 | 31719211 | 31722915 | Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Cca03g01361 | 1 | 975 | Receptor kinase-like Gene Family | AT1G09970 | 60.387 | 0.0 | 1148 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | RLK-Pelle_LRR-XI-1 | Cca03g01361 | Pkinase | 1.9e-43 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cca03g01361 | - | - | gmx:100779554 | 1679.84 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Cca03g01361 | 03 | 31719211 | 31722915 | Cca03g01361 | 03 | 31719211 | 31722915 | ECH |