Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca03g01360 ATGTTAGCGAGTTCTCTTGAGTCGTTCGAAGGGTTCCACGAGGGATGGGTTCAGCGTCAAGAGAAGTTGCTGGCGTTGTTGCCGCGGCTTCTCAGCGCTGAGAGCGAGGAGCAACAGAAAAGCGTAATCGAGCAAGTTCTGTGTGACTACCAGCAGTTTCTGGAAGAGAAAGCGAGGTTGGCAAACGCTGACGTCTTCCTCCTCTTCTCGGCGCCATGGCTGTCGGCGTACGAGAGGGCGCTCCTCTGGATCGGGGACTACAAGGCGTCGTTGATAGTCCGTCTACTAGAGGGCGGCGTGGAGGGGTTGACGgcggagcagagggagggggtggagcgtgtgagggaggagacgaagagagcggagaggGAGGTGTCTGAGGCAATGGCGTCGGTTCAGGAGAGCATGGCCAGCCCGCGCATGGTGGGGCAGGAGCAGGAGCAGGAAGCGGCCATTCACTGTTTCAAGGAGGCGCTCAAGAAGCTTTCCCAGAGAGCCGATGAGCTTCGCGCCTCCACCATGAGGAAGCTCGTGCCGATACTGTCTCCGCCGCAGACGGTGCAGCTGCTGGCCGCCACCATCAACTTTCAGATACGCCTTCGGAAGTTGGGATTGCAAAGAGACCAGGAACCGTCGCCTTCAGACATCACTTCCTCTATTTAA 663 0.5279 MLASSLESFEGFHEGWVQRQEKLLALLPRLLSAESEEQQKSVIEQVLCDYQQFLEEKARLANADVFLLFSAPWLSAYERALLWIGDYKASLIVRLLEGGVEGLTAEQREGVERVREETKRAEREVSEAMASVQESMASPRMVGQEQEQEAAIHCFKEALKKLSQRADELRASTMRKLVPILSPPQTVQLLAATINFQIRLRKLGLQRDQEPSPSDITSSI 220
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca03g01360 220 Pfam Seed dormancy control 30 96 IPR025422 GO:0006351|GO:0043565
Cca03g01360 220 Coils Coil 104 131 - -
Cca03g01360 220 ProSiteProfiles DOG1 domain profile. 6 210 IPR025422 GO:0006351|GO:0043565
Cca03g01360 220 Coils Coil 152 172 - -
Cca03g01360 220 PANTHER TRANSCRIPTION FACTOR HBP-1B 4 210 - -
Cca03g01360 220 PANTHER - 4 210 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca03g01360 Cca-Chr3 31697879 31698541 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca03g01360 8 203 bZIP Transcription Factor Family AT5G06950 25.962 4.79e-20 85.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca03g01360 - - aprc:113865861 236.498