Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca03g01323 ATGGCAGAGAAGCAGCTGAACAGAGAGCAGTACGTGTACCTGGCCAAGCTGTCGGAGCAGGCCGAGCGCTACGAGGAGATGGTCGACTTCATGCAGAAGGTCGTCGCCGGTTGGACGCCGGCGTCGGAGCTCACGGTGGAGGAGCGCAACCTCCTCTCCGTGGCCTACAAGAACGTCATCGGGTCCCTCCGCGCGGCGTGGCGCATCGTCTCCTCCATCGAGCAGAAGGAAGAGGGCCGCAAGAACGACGAACACGTCTCCCTCGTGAAGGACTACAGATCCAAGGTCGAGAACGAGCTCTCGCAGGTCTGCGCCAGCATCCTCAATCTCCTCGACTCCCACCTCGTACCCTCTGCCGCCGCCGCCGAGTCCAAAGTCTTCTACTTGAAGATGAAGGGCGATTACCATCGCTACTTAGCGGAGTTTAAGGTTGCCGATCAGAGAAAAACCGCCGCCGAGGATACCATGTTGTCCTACAAGGCTGCTCAGGACATTGCTTATGCGGATCTTCCCCCTACTCACCCCATTAGATTGGGTCTCGCACTCAACTTCTCCGTCTTCTACTACGAAATTCTCAATCAGTCTGATAAAGCGTGTGGGATGGCTAAGCAGGCTTTTGAAGAGGCAATTGCTGAGCTGGACACCTTAGGAGAAGAATCCTACAAAGACAGCACCCTCATAATGCAACTTCTAAGAGACAACCTCACACTTTGGACTTCTGATGTCCAGGACCAGCTTGATGAGCCCTGA 750 0.5547 MAEKQLNREQYVYLAKLSEQAERYEEMVDFMQKVVAGWTPASELTVEERNLLSVAYKNVIGSLRAAWRIVSSIEQKEEGRKNDEHVSLVKDYRSKVENELSQVCASILNLLDSHLVPSAAAAESKVFYLKMKGDYHRYLAEFKVADQRKTAAEDTMLSYKAAQDIAYADLPPTHPIRLGLALNFSVFYYEILNQSDKACGMAKQAFEEAIAELDTLGEESYKDSTLIMQLLRDNLTLWTSDVQDQLDEP 249
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca03g01323 249 PIRSF 14-3-3 2 248 IPR000308 -
Cca03g01323 249 PRINTS 14-3-3 protein zeta signature 43 72 IPR000308 -
Cca03g01323 249 PRINTS 14-3-3 protein zeta signature 92 116 IPR000308 -
Cca03g01323 249 PRINTS 14-3-3 protein zeta signature 123 145 IPR000308 -
Cca03g01323 249 PRINTS 14-3-3 protein zeta signature 158 184 IPR000308 -
Cca03g01323 249 PRINTS 14-3-3 protein zeta signature 185 211 IPR000308 -
Cca03g01323 249 PRINTS 14-3-3 protein zeta signature 212 241 IPR000308 -
Cca03g01323 249 PANTHER BNAC02G00320D PROTEIN 5 245 - -
Cca03g01323 249 PANTHER 14-3-3 PROTEIN 5 245 IPR000308 -
Cca03g01323 249 ProSitePatterns 14-3-3 proteins signature 2. 221 240 IPR023409 -
Cca03g01323 249 ProSitePatterns 14-3-3 proteins signature 1. 49 59 IPR023409 -
Cca03g01323 249 Coils Coil 14 34 - -
Cca03g01323 249 Pfam 14-3-3 protein 14 239 IPR023410 -
Cca03g01323 249 SMART 1433_4 8 248 IPR023410 -
Cca03g01323 249 Gene3D - 1 248 IPR036815 -
Cca03g01323 249 SUPERFAMILY 14-3-3 protein 6 241 IPR036815 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca03g01323 Cca-Chr3 31139563 31142412 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca03g01323 6 243 14-3-3 family AT5G10450 86.975 1.19e-156 434
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca03g01323 K06630 - gmx:100818967 454.136
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca03g01323 03 31139563 31142412 Cca03g01323 03 31139563 31142412 ECH