Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca03g01319 ATGGGAAAAGATTGTGGAACCTGGGTGCCGCATCTACAATTTGGATGGCAATCACCAAATCTGAAACCCCTTGATGTGGGGAAGCAAGATGGTAGTTCTGCAGCTATGAACCCTGGCTATAATATGATCTCTAGCAATGAGACAATGCCAGCTTTTGCGTCCTCTTCACTGCCACATTTGCAGTTAGGACATTCTGATGAACCTGGTGGTTGGTTTTATTGTTTGCCACGCTTTCGACAGGGATTTACTCCTGCTCCAAACTTCACAGCTGAGGGTAAACCCCTTGCTGATCATGTGAAAGGTTTTGGTGACAGAATTGCTCCCCATGGTGAACCTAGCACCCCTCAGAAACAATTTCTTGTTATTGACCAAACGGGTGGTCAAACGACTATTGTTTATAGTTCTAGGTTTGGGAGTCCCAGTGAATGCCGTGCTTCTTGGCATTCAAAATTGCATGGTGCTAACTATTTAAGGGGGAATGAACCTTTAAGAAGAGATTTGAATCTGAATTTGAATCATTTGACTCGGCCAACATTGGCCAATACAGTCGATGAGAATCCGGGAACCAGCATTGAAAGTGAGATGCATGAAGACACAGAAGAAATTAATGCATTGCTTTACTCGGACAGTGATGACTATTCTACCCAGgatggtgatgatgatgatgaAGTTACTAGCACGGGGCATTCTCCAAGTACAATGACCACTCATGATAACCATCAAACCTTTAGGGCAAGTGTAGAAGAAGTTGCGAGCTCTTCCAGTAAAACCAAGAAGAGGAAGCTATTGGATGGTTATTATGATGACATCCAACTCATCGATACAGCCAGTTCTCAGAATCTGAACAAATCTTTTGCCACAGGAGATGATGCAGAATCAAGATGTTCTAGTAACAACAATGAGGGATCCTTGTCCGGCAGTAAGAGGATGAAAAAGGAGAAGATACGAGATGTTCTGAGCATTCTCCAGAGCATAATTCCTGGCCGGAAGGATAAGGACCCAGTCATGCTTCTCGACGATGCCATACATTGCTTGAAATCCTTAAAACACAAGGCTCAAGCGCTCGGACTTGATGCCTTGTAA 1083 0.4312 MGKDCGTWVPHLQFGWQSPNLKPLDVGKQDGSSAAMNPGYNMISSNETMPAFASSSLPHLQLGHSDEPGGWFYCLPRFRQGFTPAPNFTAEGKPLADHVKGFGDRIAPHGEPSTPQKQFLVIDQTGGQTTIVYSSRFGSPSECRASWHSKLHGANYLRGNEPLRRDLNLNLNHLTRPTLANTVDENPGTSIESEMHEDTEEINALLYSDSDDYSTQDGDDDDEVTSTGHSPSTMTTHDNHQTFRASVEEVASSSSKTKKRKLLDGYYDDIQLIDTASSQNLNKSFATGDDAESRCSSNNNEGSLSGSKRMKKEKIRDVLSILQSIIPGRKDKDPVMLLDDAIHCLKSLKHKAQALGLDAL 360
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca03g01319 360 PANTHER TRANSCRIPTION FACTOR BHLH145 1 358 - -
Cca03g01319 360 PANTHER TRANSCRIPTION FACTOR BHLH145 1 358 IPR037546 -
Cca03g01319 360 MobiDBLite consensus disorder prediction 227 242 - -
Cca03g01319 360 MobiDBLite consensus disorder prediction 285 310 - -
Cca03g01319 360 MobiDBLite consensus disorder prediction 210 242 - -
Cca03g01319 360 MobiDBLite consensus disorder prediction 285 305 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca03g01319 Cca-Chr3 31002693 31006235 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca03g01319 70 353 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G50010 30.717 1.33e-24 100
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca03g01319 - - gmx:102668102 569.696
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca03g01319 03 31002693 31006235 Cca03g01319 03 31002693 31006235 ECH
Cca05g01107 05 28263760 28264793 Cca03g01319 03 31002693 31006235 PCT