Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca03g01249 ATGGACAAGTTGTCTATCCTCAACAACACTATTGATCGTGTGAAATATCTTCAAAATCGTATAAAAGTTTTGGAGGAAGAGAACCAAAAGAGAAGGATGGAATCAATGACGACATTAGCAAATAAAAAACCTAATGTTAATGTTAGTGACAACTTTTTTGGGATTTCTAATGGCTTAGATAGACCTAGCAAGACATTCCCAACGGTTCAAGTAAGCATCTCAACAAAAGATGTAATCATCAAAGTTATTTGTGACAAACGAAATGGCATTGTAAGGAAGTTATTGGCCACGCTTGCAATTCATAACCTCTCCGTTGTTTGTAGCAATGTTTTGCCATTTGGGAGTTATGCTCTAAACATCTCCATCATTGCTAAGGTTGAGATGAAGGGGGTGTTTGAAGCTCTCAACCAAATTTTAAAAAGGAGTAGGGACGAAGAGTGGGATTGGAAAAAACTTCATGGAATCATTACTGTAGATGTTGCTCGACACATGAAAGAACATGCAACGCCACTCTATGAGAATCTTAAAGACCTGCTGGCTTGGAAACATTCCCCAGATGGGTGTTTCTCGGTTCAATCTGCATATAAGGTGGTCCAGGGTCATGATGGGAGTCAGAATCATGGATTATTTAGATGTCAGCAGGAGCCCGAGACCACTTGTCATACATTAAGAGACTGCAGTGTTATAATCGTGCTGGCTGTGGAGGGATTGTCCAAACCATCTGGGTGGTTTTATGTTTGTGTTCTCGTGTACCTTGGGGACATGCATAGTGCTATAGGTTGA 783 0.4036 MDKLSILNNTIDRVKYLQNRIKVLEEENQKRRMESMTTLANKKPNVNVSDNFFGISNGLDRPSKTFPTVQVSISTKDVIIKVICDKRNGIVRKLLATLAIHNLSVVCSNVLPFGSYALNISIIAKVEMKGVFEALNQILKRSRDEEWDWKKLHGIITVDVARHMKEHATPLYENLKDLLAWKHSPDGCFSVQSAYKVVQGHDGSQNHGLFRCQQEPETTCHTLRDCSVIIVLAVEGLSKPSGWFYVCVLVYLGDMHSAIG 260
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca03g01249 260 PANTHER BHLH TRANSCRIPTION FACTOR 1 131 - -
Cca03g01249 260 Coils Coil 7 34 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca03g01249 Cca-Chr3 29751175 29755669 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca03g01249 1 127 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G37850 35.433 1.22e-17 79.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca03g01249 - - ccaj:109790958 249.98