Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca03g01159 ATGAAACTTATCATCATAACTTTCTCTTGCATTTTCCTTTTGTCTACTACCATCTCAGCTCGCACTTTTTCAGATTATATCAATCCAGATTTCACTGCCTCATATCTTAAGTTCATTGACAACTTTGGAACCTTCCTGTTGTCTCAAAACAAAACATTCAAGGCTGCAATATTCAACCCTGGTGACCAACAAGCCCGTTTCTATCTTTGTGTCATTCATGCTGCCTCCAACACTATCATTTGGTCTGCAAACCGTGATGGCCCCATCTCAGATTCTGGTAAAATGTTTCTAACTGTCAGAGGGATTACAATTATTGATGAAGATGGGGACAACAAATGGTCAACGCCATCTTTGAAGTCTCAAGTAAATAGGCTTGTGCTGACTGAGATGGGAAATCTTGTCTTACTTGACAAGTCCAATGATTCTCTTTGGGAGAGTTTCCAAAACCCAACTGACACAATTGTAATTGGACAACGTTTGCCTGTTGGAAAATCTTTGTCAAGTGAAGGGTCCAATTCAAACTTGTCAACAACAAATTACAAGCTCACAATAACGTCCTCTGATGCAATACTGCAATGGTATGGACAGACATACTGGAAACTGTCCATGGATATAGAAGTCTATAAGAATTCGTATGATGTGGTTGAATACATGGCCATAAACAACACAGGGTTTTATCTCTTTGGAGTTGGTGGAACCGTTTTTCAACTGAGTTTGCCACTGGCTAGTTTTCGAATTGCCAAGTTGGATACCCATGGCCACTTCACTATCAACAGCTTTTCTGGCACTAACTTGAAGCAGGAGTTTGTGGGGCCAGGTGATGGATGTCAAACTCCTTTAGCTTGTGGAAGAGCAGGTTTATGCACTGAGAACACTGTTTCATCTACACCTGTTTGTTCTTGTCCCCCAAACTTCCATGTAGGCTCAGTAACTGTTCCTGCATGGGATTTTTCTATAAAAACACAACTGGTTCTTGTTACATGGTTGAGAATGAGTTGGGATCGATTCAGTCAAAGTTCTAAAAAAGGGGGTTTTCCTGTGGCAGTTGCTGTGCTATTACCTATTCTTGGATTCATTATTGTGACGGCCATAGTTTTCCTTGTGTGGAGAAAATTAACACTTTCAAGAATGAAAGAAGTGAAACTAGGGAAAAAGTCACCTTCTTCAGGGGACCTTGATGCCTTCTACATTCCTGGCTTACCTGCAAGGTTTGACTATGAAGAGCTTGAGGAGGCCACAGATAACTTCAAGACTCTAATAGGGTCGGGTGGATTTGGAGCAGTGTACAAGGGTGTGCTTCCTGACAAGTCCGTTGTGGCAGTAAAGAAAATAGTGAACATAGGCATTCAAGGGAAAAAAGACTTCTGCACTGAGATTGGTGTTATTGGAAACATCCACCATGTTAACTTGGTCAAACTGAAAGGCTTTTGTGCTCAAGGGAGACACCGTTTGTTGGTGTATGAGTACATGAACCGTGGATCCCTTGACCGAACCCTCTTTGGTGGTGGACCCGTTTTGGAATGGCAAGAGAGGTTTGATGTGGCGCTTGGAACAGCACGTGGACTTGCTTACCTTCACAGTGGCTGTGAGCAAAAGGTTATCCATTGTGACATCAAACCCGAGAACATTCTCTTGCAGGATCAGTTTCAAGCCAAGATATCTGATTTCGGACTCTCGAAACTCCTTAGTTCTGAACAGTCTGGTTTGTTCACAACAATGAGAGGCACACGTGGCTATCTCGCTCCAGAGTGGCTCACCAACTCAGCCATTACTGAAAAAACTGATGTCTATAGCTTTGGAATGGTACTTCTTGAACTTGTAAGTGGAAGGAAGAACTGTTATTTTAGATCGAGAAGCCATAGCATTGATGATAGCAACAGTGGTGGAGGAAATTCCTCAACCTCATCAACACCAGGGTTGGTTTATTTTCCTCTATTTGCATTGGAGATGCATGAGCAAGGGAGTTACCTAGAGTTGGCTGATCCAAGGCTAGAAGGACGTGTTACATGTGAAGATGTGGAGAAACTTGTTCGCATTGCCTTGTGTTGCGTTCATGAAGAACCAGCTCTTAGGCCAAACATGGTAACTGTTGTTGGCATGTTGGAGGGTAGTACTCCATTGCCACACCCCAGGATAGAATCTTTGAACTTCCTGCGGTTTTATGGACGTAGGTTTACCGAGGCTTCCACCATAGCGGAAGAAAATGGGTATGCTTCTATGCTGCATCAACAAGCACGTGATTCTACAAGCATGCCAAGTGATTCACTAACTGGTCGTTTTTCTTACATTTCTTCGCAAAATATCTCGGGTCCAAGATAG 2319 0.4282 MKLIIITFSCIFLLSTTISARTFSDYINPDFTASYLKFIDNFGTFLLSQNKTFKAAIFNPGDQQARFYLCVIHAASNTIIWSANRDGPISDSGKMFLTVRGITIIDEDGDNKWSTPSLKSQVNRLVLTEMGNLVLLDKSNDSLWESFQNPTDTIVIGQRLPVGKSLSSEGSNSNLSTTNYKLTITSSDAILQWYGQTYWKLSMDIEVYKNSYDVVEYMAINNTGFYLFGVGGTVFQLSLPLASFRIAKLDTHGHFTINSFSGTNLKQEFVGPGDGCQTPLACGRAGLCTENTVSSTPVCSCPPNFHVGSVTVPAWDFSIKTQLVLVTWLRMSWDRFSQSSKKGGFPVAVAVLLPILGFIIVTAIVFLVWRKLTLSRMKEVKLGKKSPSSGDLDAFYIPGLPARFDYEELEEATDNFKTLIGSGGFGAVYKGVLPDKSVVAVKKIVNIGIQGKKDFCTEIGVIGNIHHVNLVKLKGFCAQGRHRLLVYEYMNRGSLDRTLFGGGPVLEWQERFDVALGTARGLAYLHSGCEQKVIHCDIKPENILLQDQFQAKISDFGLSKLLSSEQSGLFTTMRGTRGYLAPEWLTNSAITEKTDVYSFGMVLLELVSGRKNCYFRSRSHSIDDSNSGGGNSSTSSTPGLVYFPLFALEMHEQGSYLELADPRLEGRVTCEDVEKLVRIALCCVHEEPALRPNMVTVVGMLEGSTPLPHPRIESLNFLRFYGRRFTEASTIAEENGYASMLHQQARDSTSMPSDSLTGRFSYISSQNISGPR 772
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca03g01159 772 CDD STKc_IRAK 420 703 - -
Cca03g01159 772 CDD B_lectin 43 150 IPR001480 -
Cca03g01159 772 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-KINASE 336 772 - -
Cca03g01159 772 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-KINASE 8 310 - -
Cca03g01159 772 SUPERFAMILY Protein kinase-like (PK-like) 392 702 IPR011009 -
Cca03g01159 772 ProSitePatterns Serine/Threonine protein kinases active-site signature. 533 545 IPR008271 GO:0004672|GO:0006468
Cca03g01159 772 Gene3D Transferase(Phosphotransferase) domain 1 490 707 - -
Cca03g01159 772 Gene3D Phosphorylase Kinase; domain 1 400 489 - -
Cca03g01159 772 Pfam D-mannose binding lectin 78 164 IPR001480 -
Cca03g01159 772 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD2-5 336 772 - -
Cca03g01159 772 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD2-5 8 310 - -
Cca03g01159 772 ProSitePatterns Protein kinases ATP-binding region signature. 420 443 IPR017441 GO:0005524
Cca03g01159 772 SMART blect_4 37 150 IPR001480 -
Cca03g01159 772 SUPERFAMILY alpha-D-mannose-specific plant lectins 69 201 IPR036426 -
Cca03g01159 772 ProSiteProfiles Protein kinase domain profile. 414 712 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cca03g01159 772 ProSiteProfiles Bulb-type lectin domain profile. 30 148 IPR001480 -
Cca03g01159 772 PIRSF SRK 1 322 IPR024171 GO:0004674
Cca03g01159 772 PIRSF SRK 319 755 IPR024171 GO:0004674
Cca03g01159 772 Gene3D - 41 196 - -
Cca03g01159 772 Pfam Protein kinase domain 417 614 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cca03g01159 772 SMART serkin_6 414 701 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca03g01159 Cca-Chr3 27850225 27852798 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca03g01159 319 710 Receptor kinase-like Gene Family AT5G20050 38.257 8.15e-78 256
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Cca03g01159 Pkinase 1.7e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca03g01159 - - cpap:110816744 975.696
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca03g01159 03 27850225 27852798 Cca03g01159 03 27850225 27852798 ECH