Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cca03g01159 | ATGAAACTTATCATCATAACTTTCTCTTGCATTTTCCTTTTGTCTACTACCATCTCAGCTCGCACTTTTTCAGATTATATCAATCCAGATTTCACTGCCTCATATCTTAAGTTCATTGACAACTTTGGAACCTTCCTGTTGTCTCAAAACAAAACATTCAAGGCTGCAATATTCAACCCTGGTGACCAACAAGCCCGTTTCTATCTTTGTGTCATTCATGCTGCCTCCAACACTATCATTTGGTCTGCAAACCGTGATGGCCCCATCTCAGATTCTGGTAAAATGTTTCTAACTGTCAGAGGGATTACAATTATTGATGAAGATGGGGACAACAAATGGTCAACGCCATCTTTGAAGTCTCAAGTAAATAGGCTTGTGCTGACTGAGATGGGAAATCTTGTCTTACTTGACAAGTCCAATGATTCTCTTTGGGAGAGTTTCCAAAACCCAACTGACACAATTGTAATTGGACAACGTTTGCCTGTTGGAAAATCTTTGTCAAGTGAAGGGTCCAATTCAAACTTGTCAACAACAAATTACAAGCTCACAATAACGTCCTCTGATGCAATACTGCAATGGTATGGACAGACATACTGGAAACTGTCCATGGATATAGAAGTCTATAAGAATTCGTATGATGTGGTTGAATACATGGCCATAAACAACACAGGGTTTTATCTCTTTGGAGTTGGTGGAACCGTTTTTCAACTGAGTTTGCCACTGGCTAGTTTTCGAATTGCCAAGTTGGATACCCATGGCCACTTCACTATCAACAGCTTTTCTGGCACTAACTTGAAGCAGGAGTTTGTGGGGCCAGGTGATGGATGTCAAACTCCTTTAGCTTGTGGAAGAGCAGGTTTATGCACTGAGAACACTGTTTCATCTACACCTGTTTGTTCTTGTCCCCCAAACTTCCATGTAGGCTCAGTAACTGTTCCTGCATGGGATTTTTCTATAAAAACACAACTGGTTCTTGTTACATGGTTGAGAATGAGTTGGGATCGATTCAGTCAAAGTTCTAAAAAAGGGGGTTTTCCTGTGGCAGTTGCTGTGCTATTACCTATTCTTGGATTCATTATTGTGACGGCCATAGTTTTCCTTGTGTGGAGAAAATTAACACTTTCAAGAATGAAAGAAGTGAAACTAGGGAAAAAGTCACCTTCTTCAGGGGACCTTGATGCCTTCTACATTCCTGGCTTACCTGCAAGGTTTGACTATGAAGAGCTTGAGGAGGCCACAGATAACTTCAAGACTCTAATAGGGTCGGGTGGATTTGGAGCAGTGTACAAGGGTGTGCTTCCTGACAAGTCCGTTGTGGCAGTAAAGAAAATAGTGAACATAGGCATTCAAGGGAAAAAAGACTTCTGCACTGAGATTGGTGTTATTGGAAACATCCACCATGTTAACTTGGTCAAACTGAAAGGCTTTTGTGCTCAAGGGAGACACCGTTTGTTGGTGTATGAGTACATGAACCGTGGATCCCTTGACCGAACCCTCTTTGGTGGTGGACCCGTTTTGGAATGGCAAGAGAGGTTTGATGTGGCGCTTGGAACAGCACGTGGACTTGCTTACCTTCACAGTGGCTGTGAGCAAAAGGTTATCCATTGTGACATCAAACCCGAGAACATTCTCTTGCAGGATCAGTTTCAAGCCAAGATATCTGATTTCGGACTCTCGAAACTCCTTAGTTCTGAACAGTCTGGTTTGTTCACAACAATGAGAGGCACACGTGGCTATCTCGCTCCAGAGTGGCTCACCAACTCAGCCATTACTGAAAAAACTGATGTCTATAGCTTTGGAATGGTACTTCTTGAACTTGTAAGTGGAAGGAAGAACTGTTATTTTAGATCGAGAAGCCATAGCATTGATGATAGCAACAGTGGTGGAGGAAATTCCTCAACCTCATCAACACCAGGGTTGGTTTATTTTCCTCTATTTGCATTGGAGATGCATGAGCAAGGGAGTTACCTAGAGTTGGCTGATCCAAGGCTAGAAGGACGTGTTACATGTGAAGATGTGGAGAAACTTGTTCGCATTGCCTTGTGTTGCGTTCATGAAGAACCAGCTCTTAGGCCAAACATGGTAACTGTTGTTGGCATGTTGGAGGGTAGTACTCCATTGCCACACCCCAGGATAGAATCTTTGAACTTCCTGCGGTTTTATGGACGTAGGTTTACCGAGGCTTCCACCATAGCGGAAGAAAATGGGTATGCTTCTATGCTGCATCAACAAGCACGTGATTCTACAAGCATGCCAAGTGATTCACTAACTGGTCGTTTTTCTTACATTTCTTCGCAAAATATCTCGGGTCCAAGATAG | 2319 | 0.4282 | MKLIIITFSCIFLLSTTISARTFSDYINPDFTASYLKFIDNFGTFLLSQNKTFKAAIFNPGDQQARFYLCVIHAASNTIIWSANRDGPISDSGKMFLTVRGITIIDEDGDNKWSTPSLKSQVNRLVLTEMGNLVLLDKSNDSLWESFQNPTDTIVIGQRLPVGKSLSSEGSNSNLSTTNYKLTITSSDAILQWYGQTYWKLSMDIEVYKNSYDVVEYMAINNTGFYLFGVGGTVFQLSLPLASFRIAKLDTHGHFTINSFSGTNLKQEFVGPGDGCQTPLACGRAGLCTENTVSSTPVCSCPPNFHVGSVTVPAWDFSIKTQLVLVTWLRMSWDRFSQSSKKGGFPVAVAVLLPILGFIIVTAIVFLVWRKLTLSRMKEVKLGKKSPSSGDLDAFYIPGLPARFDYEELEEATDNFKTLIGSGGFGAVYKGVLPDKSVVAVKKIVNIGIQGKKDFCTEIGVIGNIHHVNLVKLKGFCAQGRHRLLVYEYMNRGSLDRTLFGGGPVLEWQERFDVALGTARGLAYLHSGCEQKVIHCDIKPENILLQDQFQAKISDFGLSKLLSSEQSGLFTTMRGTRGYLAPEWLTNSAITEKTDVYSFGMVLLELVSGRKNCYFRSRSHSIDDSNSGGGNSSTSSTPGLVYFPLFALEMHEQGSYLELADPRLEGRVTCEDVEKLVRIALCCVHEEPALRPNMVTVVGMLEGSTPLPHPRIESLNFLRFYGRRFTEASTIAEENGYASMLHQQARDSTSMPSDSLTGRFSYISSQNISGPR | 772 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cca03g01159 | 772 | CDD | STKc_IRAK | 420 | 703 | - | - | |
Cca03g01159 | 772 | CDD | B_lectin | 43 | 150 | IPR001480 | - | |
Cca03g01159 | 772 | PANTHER | G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-KINASE | 336 | 772 | - | - | |
Cca03g01159 | 772 | PANTHER | G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-KINASE | 8 | 310 | - | - | |
Cca03g01159 | 772 | SUPERFAMILY | Protein kinase-like (PK-like) | 392 | 702 | IPR011009 | - | |
Cca03g01159 | 772 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 533 | 545 | IPR008271 | GO:0004672|GO:0006468 | |
Cca03g01159 | 772 | Gene3D | Transferase(Phosphotransferase) domain 1 | 490 | 707 | - | - | |
Cca03g01159 | 772 | Gene3D | Phosphorylase Kinase; domain 1 | 400 | 489 | - | - | |
Cca03g01159 | 772 | Pfam | D-mannose binding lectin | 78 | 164 | IPR001480 | - | |
Cca03g01159 | 772 | PANTHER | G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD2-5 | 336 | 772 | - | - | |
Cca03g01159 | 772 | PANTHER | G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD2-5 | 8 | 310 | - | - | |
Cca03g01159 | 772 | ProSitePatterns | Protein kinases ATP-binding region signature. | 420 | 443 | IPR017441 | GO:0005524 | |
Cca03g01159 | 772 | SMART | blect_4 | 37 | 150 | IPR001480 | - | |
Cca03g01159 | 772 | SUPERFAMILY | alpha-D-mannose-specific plant lectins | 69 | 201 | IPR036426 | - | |
Cca03g01159 | 772 | ProSiteProfiles | Protein kinase domain profile. | 414 | 712 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Cca03g01159 | 772 | ProSiteProfiles | Bulb-type lectin domain profile. | 30 | 148 | IPR001480 | - | |
Cca03g01159 | 772 | PIRSF | SRK | 1 | 322 | IPR024171 | GO:0004674 | |
Cca03g01159 | 772 | PIRSF | SRK | 319 | 755 | IPR024171 | GO:0004674 | |
Cca03g01159 | 772 | Gene3D | - | 41 | 196 | - | - | |
Cca03g01159 | 772 | Pfam | Protein kinase domain | 417 | 614 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Cca03g01159 | 772 | SMART | serkin_6 | 414 | 701 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Cca03g01159 | Cca-Chr3 | 27850225 | 27852798 | Dispersed/Transposed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Cca03g01159 | 319 | 710 | Receptor kinase-like Gene Family | AT5G20050 | 38.257 | 8.15e-78 | 256 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | RLK-Pelle_SD-2b | Cca03g01159 | Pkinase | 1.7e-49 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cca03g01159 | - | - | cpap:110816744 | 975.696 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Cca03g01159 | 03 | 27850225 | 27852798 | Cca03g01159 | 03 | 27850225 | 27852798 | ECH |