Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca03g01149 ATGGGTGCCAAAGGGGGTACGGATGGTCCTATAGTTGGTACGGAAGCTGCAGCAAGAGCCTATGATGCTGCACTTCTATGCCTTAAAGGCTCCTCAGCAAATCTTAACTTCCCTTCAAGCTCTTCACAATATATTCTAGGAGATGCTGCCATGTCTCCCAAATCAATCCAAAGAGTTGCTGCAGCAGCTGCAAATAGTTTCATTAACAATGCCACCATTCCCCCTTCACCAACTCCTCcatcaacctcatcatcatcatcatTGGTCTCATCCCCCTCAGTGGCTTCTTCTCCCTCGGATCAAATGGATGATGAAGCCTCACTAATATCATCCTTTGAGGCCTACACTAGTTCTGATCAAGCAAATGAATCAGTGGCTGTGATGGAACCTTGGTACACCTTTGCTGATGATCTTCAATCACCCAAGTATGTTGATCAGATGTTAAGTGGTGCTTTCTTTGATGCTGATTCGTCTCATCTGCTTGATGATCTATACGAAGAAAGCGACATTCGTTTGTGGAGCTTCTGTTGA 531 0.4331 MGAKGGTDGPIVGTEAAARAYDAALLCLKGSSANLNFPSSSSQYILGDAAMSPKSIQRVAAAAANSFINNATIPPSPTPPSTSSSSSLVSSPSVASSPSDQMDDEASLISSFEAYTSSDQANESVAVMEPWYTFADDLQSPKYVDQMLSGAFFDADSSHLLDDLYEESDIRLWSFC 176
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca03g01149 176 MobiDBLite consensus disorder prediction 73 102 - -
Cca03g01149 176 Gene3D AP2/ERF domain 13 39 IPR036955 GO:0003700|GO:0006355
Cca03g01149 176 MobiDBLite consensus disorder prediction 82 102 - -
Cca03g01149 176 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF042-RELATED 14 176 - -
Cca03g01149 176 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF014 14 176 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca03g01149 Cca-Chr3 27733279 27737858 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca03g01149 15 175 AP2-EREBP Transcription Factor Family AT1G21910 43.605 2.26e-21 85.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca03g01149 - - gmx:100819512 221.09
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca03g01149 03 27733279 27737858 Cca03g01149 03 27733279 27737858 ECH